Factsheet for Bra040046.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22149	Canola	extracellular	99.45	99.45
AT3G08030.1	Thale cress	extracellular	91.23	91.23
Bra029693.1-P	Field mustard	extracellular	90.14	90.14
VIT_13s0064g00460.t01	Wine grape	extracellular	70.14	71.11
PGSC0003DMT400017671	Potato	extracellular	69.86	69.48
Solyc01g087540.2.1	Tomato	extracellular	69.32	68.94
KRH32968	Soybean	endoplasmic reticulum	66.3	65.94
KRH13974	Soybean	nucleus	66.03	65.67
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	64.93	65.29
KRH23881	Soybean	extracellular	60.55	62.61
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	64.66	60.51
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	54.52	58.53
Bra004651.1-P	Field mustard	extracellular	57.53	56.76
Bra011349.1-P	Field mustard	golgi	55.89	55.89
EER93244	Sorghum	extracellular, vacuole	58.9	55.7
Bra016917.1-P	Field mustard	extracellular	56.44	55.08
Bra009841.1-P	Field mustard	extracellular	55.34	55.04
Bra020500.1-P	Field mustard	extracellular	54.25	54.1
Os03t0807700-01	Rice	plastid	58.08	53.94
Bra004650.1-P	Field mustard	extracellular	54.52	53.64
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	57.81	53.15
Zm00001d034547_P002	Maize	extracellular, vacuole	58.9	51.93
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	44.66	51.58
Bra035192.1-P	Field mustard	extracellular	47.4	50.73
Bra003558.1-P	Field mustard	extracellular	50.96	50.41
HORVU5Hr1G109880.2	Barley	golgi, vacuole	57.53	50.36
TraesCS5A01G458700.1	Wheat	extracellular, golgi	57.81	48.84
Os07t0206900-01	Rice	cytosol, peroxisome	10.68	39.8
Bra005419.1-P	Field mustard	plasma membrane	42.19	38.5
Bra032349.1-P	Field mustard	extracellular, golgi, plasma membrane	42.74	38.14
Bra006241.1-P	Field mustard	extracellular, plasma membrane	29.59	28.05

Protein Annotations

EnsemblPlants:Bra040046.1	EnsemblPlants:Bra040046.1-P	EnsemblPlantsGene:Bra040046	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF2	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002544587	UniProt:M4FG21	MapMan:35.2	:	:

Description

AT3G08030 (E=6e-185) | unknown protein

Coordinates

chrA01:-:27786708..27788379

Molecular Weight (calculated)

39048.9 Da

IEP (calculated)

7.265

GRAVY (calculated)

-0.008

Length

365 amino acids

Sequence
(BLAST)

001: MDVPKAIVLP LLLVLCGAAL GASAYEGYLR NGNFEESPKK TDMKKTVLIG KTALPEWETT GFVEYISGGP QPGGMFFPVA HGVHAVRLGN EATISQKLKV
101: KPGSLYSLTF GASRTCAQEE VLRVSVPPQT GDLPLQTLYN SFGGDVYAWA FVPKTSEVTV TFHNPGVQED PACGPLLDAV AIKELVQPTY TEGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDVTSPLPG WIIESLKAVK FIDSKNFNVP FGQAAIELVA GKESAIAQVI RTSPGQTYSL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVTH TSVGGGHVKT ASLKFKALEA RTRITFFSGF YHTKKNDIGS LCGPVIDQIV VSHVA

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.