CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034547_P002	Maize	extracellular, vacuole	95.85	89.37
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	88.86	86.4
Os03t0807700-01	Rice	plastid	87.82	86.26
HORVU5Hr1G109880.2	Barley	golgi, vacuole	87.82	81.3
TraesCS5A01G458700.1	Wheat	extracellular, golgi	87.56	78.24
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	65.54	69.7
VIT_13s0064g00460.t01	Wine grape	extracellular	59.33	63.61
PGSC0003DMT400017671	Potato	extracellular	59.33	62.4
VIT_08s0007g08460.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	58.55	61.58
Solyc01g087540.2.1	Tomato	extracellular	58.55	61.58
KRH13974	Soybean	nucleus	58.55	61.58
KRH32968	Soybean	endoplasmic reticulum	58.03	61.04
CDX79913	Canola	cytosol	33.68	61.03
CDY28002	Canola	extracellular	57.51	60.82
Bra029693.1-P	Field mustard	extracellular	57.25	60.55
CDY35979	Canola	extracellular	57.25	60.55
AT3G08030.1	Thale cress	extracellular	55.96	59.18
KRH23881	Soybean	extracellular	53.89	58.92
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	55.7	58.9
CDY22149	Canola	extracellular	55.7	58.9
CDY48764	Canola	cytosol	30.57	58.71
Bra004651.1-P	Field mustard	extracellular	54.4	56.76
AT2G41800.1	Thale cress	extracellular, vacuole	53.89	56.22
Os07t0206900-01	Rice	cytosol, peroxisome	14.25	56.12
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	56.48	55.9
CDY14785	Canola	extracellular, vacuole	53.37	55.68
AT2G41810.1	Thale cress	extracellular, vacuole	53.37	55.68
Bra016917.1-P	Field mustard	extracellular	53.63	55.35
Bra004650.1-P	Field mustard	extracellular	53.11	55.26
CDY06908	Canola	extracellular	53.11	54.81
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	44.56	54.43
Solyc04g015620.2.1	Tomato	plastid	48.96	51.08
Solyc04g015610.2.1	Tomato	extracellular	48.7	50.95
PGSC0003DMT400081713	Potato	endoplasmic reticulum, extracellular, plasma membrane	26.17	49.27
KXG29757	Sorghum	golgi	47.41	49.19
OQU87155	Sorghum	golgi	45.85	47.2
CDX79912	Canola	extracellular, vacuole	53.89	46.22
CDY48765	Canola	extracellular	52.85	46.05
EES11052	Sorghum	mitochondrion	42.49	43.27
KXG26630	Sorghum	extracellular	42.23	42.89
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	40.93	41.91
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	42.49	41.84
EES11054	Sorghum	extracellular, vacuole	39.9	40.74
EES01494	Sorghum	plasma membrane	41.97	40.7
KXG26629	Sorghum	golgi	41.45	38.65

Protein Annotations

Gene3D:2.60.120.260	MapMan:35.2	EntrezGene:8081206	UniProt:C5WW49	InterPro:DUF642	EnsemblPlants:EER93244
ProteinID:EER93244	ProteinID:EER93244.1	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:IPR008979	PFAM:PF04862	PANTHER:PTHR31265
PANTHER:PTHR31265:SF2	EnsemblPlantsGene:SORBI_3001G046400	SUPFAM:SSF49785	unigene:Sbi.1440	SignalP:SignalP-noTM	UniParc:UPI0001A82A71
RefSeq:XP_002466246.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:3414553..3416917

Molecular Weight (calculated)

40343.3 Da

IEP (calculated)

9.483

GRAVY (calculated)

0.131

Length

386 amino acids

Sequence
(BLAST)

001: MELPWGMLLL LVLSVSSSSS SSAAATLAVS APPPVPAPRH AQDAEGLLIN GNFETAPRKL NKTLIVGRHS LPGWTVQGHV EYVSGGPQPG GMFFAVPHGV
101: HALRLGSRAS ASQNVTVRPG ALYALTFAAT RTCAQDESLR VAVSPSLSAP ADVAVRTLYS GASADTWAWG FRASSPVAQV TFANPGVQED AACGPLLDAV
201: AIKELPAAYP TKDNLIKNDG FEIGPQVLKN STVGVLLPPK QKDATSPLPG WIIESLKAVR FIDAAHFSVP AGQYAVELVA GRESAIAQVI RTVPNRAYNL
301: SFAVGDAKNG CHGSMLVEAF AGNVTQKVPF ESAGKGGFKA AAFRFVAAGA RTRLTFYSSY YHTKVTDGVS LCGPVLDQVK VVPVKA

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.