Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79913 | Canola | cytosol | 39.78 | 68.54 |
| VIT_13s0064g00460.t01 | Wine grape | extracellular | 64.58 | 65.83 |
| AT2G41810.1 | Thale cress | extracellular, vacuole | 66.21 | 65.68 |
| CDY48764 | Canola | cytosol | 35.97 | 65.67 |
| Solyc04g015620.2.1 | Tomato | plastid | 65.94 | 65.41 |
| Bra004651.1-P | Field mustard | extracellular | 65.67 | 65.14 |
| Bra004650.1-P | Field mustard | extracellular | 65.4 | 64.69 |
| GSMUA_Achr9P25300_001 | Banana | extracellular, vacuole | 63.76 | 64.46 |
| Solyc04g015610.2.1 | Tomato | extracellular | 64.58 | 64.23 |
| CDY14785 | Canola | extracellular, vacuole | 64.31 | 63.78 |
| AT2G41800.1 | Thale cress | extracellular, vacuole | 64.31 | 63.78 |
| Bra016917.1-P | Field mustard | extracellular | 64.85 | 63.64 |
| PGSC0003DMT400081713 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 35.42 | 63.41 |
| CDY06908 | Canola | extracellular | 64.03 | 62.83 |
| EER93244 | Sorghum | extracellular, vacuole | 61.58 | 58.55 |
| Os03t0807700-01 | Rice | plastid | 60.22 | 56.23 |
| TraesCS5D01G469800.1 | Wheat | extracellular, vacuole | 60.76 | 56.17 |
| CDY48765 | Canola | extracellular | 65.12 | 53.95 |
| HORVU5Hr1G109880.2 | Barley | golgi, vacuole | 60.76 | 53.48 |
| CDX79912 | Canola | extracellular, vacuole | 65.4 | 53.33 |
| Zm00001d034547_P002 | Maize | extracellular, vacuole | 59.95 | 53.14 |
| TraesCS5A01G458700.1 | Wheat | extracellular, golgi | 60.76 | 51.62 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 50.95 | 50.82 |
| GSMUA_Achr6P29630_001 | Banana | cytosol, plastid | 42.78 | 49.68 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 50.68 | 45.93 |
| Os07t0206900-01 | Rice | cytosol, peroxisome | 11.44 | 42.86 |
| VIT_10s0003g03250.t01 | Wine grape | extracellular, golgi, plasma membrane | 41.96 | 39.29 |
| VIT_14s0068g02080.t01 | Wine grape | extracellular, plasma membrane, vacuole | 29.16 | 26.95 |
Protein Annotations
| EntrezGene:100257236 | wikigene:100257236 | MapMan:35.2 | EMBL:AM447844 | ProteinID:CAN80832 | ProteinID:CAN80832.1 |
| ProteinID:CCB55130 | ProteinID:CCB55130.1 | InterPro:DUF642 | UniProt:F6HKZ2 | EMBL:FN595991 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009058 | GO:GO:0016740 | GO:GO:0032259 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 | EntrezGene:LOC100257236 |
| wikigene:LOC100257236 | PFAM:PF04862 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF22 | SUPFAM:SSF49785 | SignalP:SignalP-noTM |
| UniParc:UPI00015CADE5 | ArrayExpress:VIT_08s0007g08460 | EnsemblPlantsGene:VIT_08s0007g08460 | EnsemblPlants:VIT_08s0007g08460.t01 | unigene:Vvi.20106 | RefSeq:XP_002283940 |
| RefSeq:XP_002283940.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:21822330..21824047
Molecular Weight (calculated)
39617.8 Da
IEP (calculated)
9.239
GRAVY (calculated)
-0.016
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MALFLSLCLV FFSIVCSSAS ATLPPYLDGL LPNGDFEKGP KASNLKKTVI KGKHSLPDWE IKGLVEYVSG GPQPGGFFLA VPRGVHAVKL GNEASISQNV
101: RVRPGFIYSL TFGATRTCAQ DEVLRVSIPG QSADLPIQTL YSTDGGDTYA WAFNATTEVV NVTFHNPGIQ EDRTCGPLLD AIAIKQMPPL KLTRGSLAKN
201: GGYETGPHVF KNFSTGVLLL PKQQDLISPL PGWIIESLKP VKYIDSKHFS VPTGLAAIEL IGGRESAIAQ IIRTVPNKSY NLTFTIGDAK NGCHGSMTVE
301: AFAAKETVKV PHASQGKGEF KAASLKFKAL SARTRITFYS AYYHTKLHDF GHMCGPVLDD VRVYPVS
101: RVRPGFIYSL TFGATRTCAQ DEVLRVSIPG QSADLPIQTL YSTDGGDTYA WAFNATTEVV NVTFHNPGIQ EDRTCGPLLD AIAIKQMPPL KLTRGSLAKN
201: GGYETGPHVF KNFSTGVLLL PKQQDLISPL PGWIIESLKP VKYIDSKHFS VPTGLAAIEL IGGRESAIAQ IIRTVPNKSY NLTFTIGDAK NGCHGSMTVE
301: AFAAKETVKV PHASQGKGEF KAASLKFKAL SARTRITFYS AYYHTKLHDF GHMCGPVLDD VRVYPVS
001: MSLVLSLCLV FLCSLVHGSH SLPAQRTPHL DGLLPNGNFE QIPNKSNMRK RQIIGKYSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKSGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKATS DLVKVTFYNP GVQEDPTCGP IVDAVAIKEI LPLRYTKGNL
201: VKNGGFETGP HVFSNFSTGI LIPAKIQDLI SPLPGWIVES LKPVKYIDNR HFKVPSGLAA IELVAGRESA IAQIIRTVSG KNYILSFVVG DAHNGCHGSM
301: MVEAFAGISA FKVTFESNDK GAFKVGRFAF RADSNRTRIT FYSGFYHTKL HDFGHLCGPV LDNVSVFLAH
101: QYVKVKSGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKATS DLVKVTFYNP GVQEDPTCGP IVDAVAIKEI LPLRYTKGNL
201: VKNGGFETGP HVFSNFSTGI LIPAKIQDLI SPLPGWIVES LKPVKYIDNR HFKVPSGLAA IELVAGRESA IAQIIRTVSG KNYILSFVVG DAHNGCHGSM
301: MVEAFAGISA FKVTFESNDK GAFKVGRFAF RADSNRTRIT FYSGFYHTKL HDFGHLCGPV LDNVSVFLAH
Arabidopsis Description
Uncharacterized protein At2g41810 [Source:UniProtKB/TrEMBL;Acc:O22939]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.