Factsheet for Bra004651.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G41810.1	Thale cress	extracellular, vacuole	88.92	88.92
CDX79912	Canola	extracellular, vacuole	98.11	80.67
Bra016917.1-P	Field mustard	extracellular	80.54	79.68
Bra004650.1-P	Field mustard	extracellular	79.46	79.25
VIT_08s0007g08460.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	65.14	65.67
Solyc04g015610.2.1	Tomato	extracellular	61.08	61.25
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	58.38	59.5
Solyc04g015620.2.1	Tomato	plastid	59.19	59.19
Bra029693.1-P	Field mustard	extracellular	57.3	58.08
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	56.76	57.53
PGSC0003DMT400081713	Potato	endoplasmic reticulum, extracellular, plasma membrane	31.62	57.07
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	50.0	54.41
EER93244	Sorghum	extracellular, vacuole	56.76	54.4
Os03t0807700-01	Rice	plastid	55.95	52.67
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	55.68	51.89
Bra011349.1-P	Field mustard	golgi	50.81	51.51
Zm00001d034547_P002	Maize	extracellular, vacuole	56.49	50.48
Bra009841.1-P	Field mustard	extracellular	50.0	50.41
Bra020500.1-P	Field mustard	extracellular	49.19	49.73
HORVU5Hr1G109880.2	Barley	golgi, vacuole	55.41	49.16
Bra003558.1-P	Field mustard	extracellular	48.38	48.51
Bra035192.1-P	Field mustard	extracellular	44.32	48.09
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	40.81	47.78
TraesCS5A01G458700.1	Wheat	extracellular, golgi	55.14	47.22
Os07t0206900-01	Rice	cytosol, peroxisome	10.54	39.8
Bra032349.1-P	Field mustard	extracellular, golgi, plasma membrane	40.27	36.43
Bra005419.1-P	Field mustard	plasma membrane	39.19	36.25
Bra006241.1-P	Field mustard	extracellular, plasma membrane	29.73	28.57

Protein Annotations

EnsemblPlants:Bra004651.1	EnsemblPlants:Bra004651.1-P	EnsemblPlantsGene:Bra004651	InterPro:DUF642	PANTHER:PTHR31265	PANTHER:PTHR31265:SF5
PFAM:PF04862	SignalP:SignalP-noTM	UniParc:UPI000254779B	UniProt:M4CKB6	MapMan:35.2	:

Description

AT2G41810 (E=8e-198) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41800.1); Has 161 Blast hits to 157 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA05:-:1235376..1237660

Molecular Weight (calculated)

40492.0 Da

IEP (calculated)

9.933

GRAVY (calculated)

0.002

Length

370 amino acids

Sequence
(BLAST)

001: MSLAISLCLA FLFALCHGSH SLPAQRTPHL DVLLPNGNFE QVPNKSNMRK RQIIGKYSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKRGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKAKF DVVKITFHNP GVQEDPSCGP LVDAVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFNNFSTGI LIPAKVQDLI SPLPGWIIES LKPVKYIDSR HFEVPSGLAA VELVAGRESA IAQIIRTVAG RNYMLSFAVG DAQNGCHGSM
301: MVEAFAGKAA FKLRFESNGK GAFKVGRFRF RADSNRTRLT FYSGFYHTKL HDFGHLCGPV LDSVSVVMTR

Best Arabidopsis Sequence Match ( AT2G41810.1 )
(BLAST)

001: MSLVLSLCLV FLCSLVHGSH SLPAQRTPHL DGLLPNGNFE QIPNKSNMRK RQIIGKYSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKSGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKATS DLVKVTFYNP GVQEDPTCGP IVDAVAIKEI LPLRYTKGNL
201: VKNGGFETGP HVFSNFSTGI LIPAKIQDLI SPLPGWIVES LKPVKYIDNR HFKVPSGLAA IELVAGRESA IAQIIRTVSG KNYILSFVVG DAHNGCHGSM
301: MVEAFAGISA FKVTFESNDK GAFKVGRFAF RADSNRTRIT FYSGFYHTKL HDFGHLCGPV LDNVSVFLAH

Arabidopsis Description

Uncharacterized protein At2g41810 [Source:UniProtKB/TrEMBL;Acc:O22939]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.