Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra004651.1-P | Field mustard | extracellular | 80.67 | 98.11 |
AT2G41810.1 | Thale cress | extracellular, vacuole | 72.67 | 88.38 |
CDY48765 | Canola | extracellular | 81.78 | 83.07 |
CDX79913 | Canola | cytosol | 38.0 | 80.28 |
CDY14785 | Canola | extracellular, vacuole | 66.0 | 80.27 |
CDY48764 | Canola | cytosol | 35.33 | 79.1 |
CDY06908 | Canola | extracellular | 64.89 | 78.07 |
VIT_08s0007g08460.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 53.33 | 65.4 |
Solyc04g015610.2.1 | Tomato | extracellular | 50.0 | 60.98 |
GSMUA_Achr9P25300_001 | Banana | extracellular, vacuole | 47.78 | 59.23 |
Solyc04g015620.2.1 | Tomato | plastid | 48.22 | 58.65 |
CDY28002 | Canola | extracellular | 47.33 | 58.36 |
CDY35979 | Canola | extracellular | 47.11 | 58.08 |
CDY22149 | Canola | extracellular | 46.67 | 57.53 |
PGSC0003DMT400081713 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 25.78 | 56.59 |
EER93244 | Sorghum | extracellular, vacuole | 46.22 | 53.89 |
CDX97108 | Canola | golgi | 43.11 | 53.01 |
Os03t0807700-01 | Rice | plastid | 45.78 | 52.42 |
CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 39.11 | 51.92 |
CDX85713 | Canola | extracellular | 42.0 | 51.64 |
TraesCS5D01G469800.1 | Wheat | extracellular, vacuole | 45.56 | 51.64 |
CDX91217 | Canola | extracellular | 41.78 | 51.37 |
CDX75247 | Canola | golgi | 41.56 | 51.23 |
CDX68849 | Canola | golgi | 41.33 | 50.96 |
CDX80511 | Canola | extracellular | 40.89 | 50.14 |
CDX88180 | Canola | extracellular | 40.89 | 50.14 |
Zm00001d034547_P002 | Maize | extracellular, vacuole | 46.0 | 50.0 |
CDY05493 | Canola | extracellular | 40.22 | 49.45 |
CDY19801 | Canola | extracellular | 40.44 | 49.19 |
HORVU5Hr1G109880.2 | Barley | golgi, vacuole | 45.33 | 48.92 |
CDY54317 | Canola | endoplasmic reticulum | 39.56 | 48.11 |
CDY57694 | Canola | extracellular | 39.56 | 48.11 |
CDX87297 | Canola | endoplasmic reticulum, extracellular | 36.0 | 47.37 |
TraesCS5A01G458700.1 | Wheat | extracellular, golgi | 45.33 | 47.22 |
CDY39990 | Canola | extracellular | 35.78 | 47.21 |
GSMUA_Achr6P29630_001 | Banana | cytosol, plastid | 33.11 | 47.15 |
CDX80516 | Canola | plastid | 28.0 | 41.18 |
Os07t0206900-01 | Rice | cytosol, peroxisome | 8.22 | 37.76 |
CDY26302 | Canola | extracellular, golgi, plasma membrane | 33.56 | 36.92 |
CDY17255 | Canola | plasma membrane | 32.44 | 36.5 |
CDX84311 | Canola | plasma membrane | 32.44 | 36.5 |
CDX99870 | Canola | plasma membrane | 30.44 | 35.13 |
CDX78563 | Canola | extracellular, plasma membrane | 24.89 | 29.09 |
CDX70545 | Canola | extracellular, vacuole | 24.67 | 29.06 |
Protein Annotations
EnsemblPlants:CDX79912 | EnsemblPlantsGene:GSBRNA2T00132767001 | InterPro:DUF642 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF5 | PFAM:PF04862 |
ProteinID:CDX79912 | ProteinID:CDX79912.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EEDE03 | MapMan:35.2 |
Description
BnaA05g02440D
Coordinates
chrLK031819:+:800649..804789
Molecular Weight (calculated)
48923.3 Da
IEP (calculated)
9.669
GRAVY (calculated)
0.070
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLAISLCLA FLFALCHGSH SLPAQRTPHL DVLLPNGNFE QVPNKSNMRK RQIIGKHSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKRGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKAKF DVVKITFHNP GVQEDPSCGP LVDAVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFNNFSTGI LIPAKVQDLI SPLPGWIIES LKPVKYIDSR HFEVPSGLAA VELVAGRESA IAQIIRTVAG RNYMLSFAVG DAQNGCHGSM
301: MVEAFAGKAA FKLRFESNGK GAFKVGRFRF RADSNRTRLT FYSGFYHTKL HDFGHLCGPV LDSCKLHQTC YVIGYNINGG GGGGLGLDRI TNIQLNWCLF
401: LTYKKCLSTP LFAFSSSSLS AMVLTASNHA GLLILMGFSQ MATLSTSLPN
101: QYVKVKRGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKAKF DVVKITFHNP GVQEDPSCGP LVDAVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFNNFSTGI LIPAKVQDLI SPLPGWIIES LKPVKYIDSR HFEVPSGLAA VELVAGRESA IAQIIRTVAG RNYMLSFAVG DAQNGCHGSM
301: MVEAFAGKAA FKLRFESNGK GAFKVGRFRF RADSNRTRLT FYSGFYHTKL HDFGHLCGPV LDSCKLHQTC YVIGYNINGG GGGGLGLDRI TNIQLNWCLF
401: LTYKKCLSTP LFAFSSSSLS AMVLTASNHA GLLILMGFSQ MATLSTSLPN
001: MSLVLSLCLV FLCSLVHGSH SLPAQRTPHL DGLLPNGNFE QIPNKSNMRK RQIIGKYSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKSGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKATS DLVKVTFYNP GVQEDPTCGP IVDAVAIKEI LPLRYTKGNL
201: VKNGGFETGP HVFSNFSTGI LIPAKIQDLI SPLPGWIVES LKPVKYIDNR HFKVPSGLAA IELVAGRESA IAQIIRTVSG KNYILSFVVG DAHNGCHGSM
301: MVEAFAGISA FKVTFESNDK GAFKVGRFAF RADSNRTRIT FYSGFYHTKL HDFGHLCGPV LDNVSVFLAH
101: QYVKVKSGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKATS DLVKVTFYNP GVQEDPTCGP IVDAVAIKEI LPLRYTKGNL
201: VKNGGFETGP HVFSNFSTGI LIPAKIQDLI SPLPGWIVES LKPVKYIDNR HFKVPSGLAA IELVAGRESA IAQIIRTVSG KNYILSFVVG DAHNGCHGSM
301: MVEAFAGISA FKVTFESNDK GAFKVGRFAF RADSNRTRIT FYSGFYHTKL HDFGHLCGPV LDNVSVFLAH
Arabidopsis Description
Uncharacterized protein At2g41810 [Source:UniProtKB/TrEMBL;Acc:O22939]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.