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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004651.1-P Field mustard extracellular 80.67 98.11
AT2G41810.1 Thale cress extracellular, vacuole 72.67 88.38
CDY48765 Canola extracellular 81.78 83.07
CDX79913 Canola cytosol 38.0 80.28
CDY14785 Canola extracellular, vacuole 66.0 80.27
CDY48764 Canola cytosol 35.33 79.1
CDY06908 Canola extracellular 64.89 78.07
VIT_08s0007g08460.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 53.33 65.4
Solyc04g015610.2.1 Tomato extracellular 50.0 60.98
GSMUA_Achr9P25300_001 Banana extracellular, vacuole 47.78 59.23
Solyc04g015620.2.1 Tomato plastid 48.22 58.65
CDY28002 Canola extracellular 47.33 58.36
CDY35979 Canola extracellular 47.11 58.08
CDY22149 Canola extracellular 46.67 57.53
PGSC0003DMT400081713 Potato endoplasmic reticulum, extracellular, plasma membrane 25.78 56.59
EER93244 Sorghum extracellular, vacuole 46.22 53.89
CDX97108 Canola golgi 43.11 53.01
Os03t0807700-01 Rice plastid 45.78 52.42
CDY54909 Canola cytoskeleton, cytosol, peroxisome 39.11 51.92
CDX85713 Canola extracellular 42.0 51.64
TraesCS5D01G469800.1 Wheat extracellular, vacuole 45.56 51.64
CDX91217 Canola extracellular 41.78 51.37
CDX75247 Canola golgi 41.56 51.23
CDX68849 Canola golgi 41.33 50.96
CDX80511 Canola extracellular 40.89 50.14
CDX88180 Canola extracellular 40.89 50.14
Zm00001d034547_P002 Maize extracellular, vacuole 46.0 50.0
CDY05493 Canola extracellular 40.22 49.45
CDY19801 Canola extracellular 40.44 49.19
HORVU5Hr1G109880.2 Barley golgi, vacuole 45.33 48.92
CDY54317 Canola endoplasmic reticulum 39.56 48.11
CDY57694 Canola extracellular 39.56 48.11
CDX87297 Canola endoplasmic reticulum, extracellular 36.0 47.37
TraesCS5A01G458700.1 Wheat extracellular, golgi 45.33 47.22
CDY39990 Canola extracellular 35.78 47.21
GSMUA_Achr6P29630_001 Banana cytosol, plastid 33.11 47.15
CDX80516 Canola plastid 28.0 41.18
Os07t0206900-01 Rice cytosol, peroxisome 8.22 37.76
CDY26302 Canola extracellular, golgi, plasma membrane 33.56 36.92
CDY17255 Canola plasma membrane 32.44 36.5
CDX84311 Canola plasma membrane 32.44 36.5
CDX99870 Canola plasma membrane 30.44 35.13
CDX78563 Canola extracellular, plasma membrane 24.89 29.09
CDX70545 Canola extracellular, vacuole 24.67 29.06
Protein Annotations
EnsemblPlants:CDX79912EnsemblPlantsGene:GSBRNA2T00132767001InterPro:DUF642PANTHER:PTHR31265PANTHER:PTHR31265:SF5PFAM:PF04862
ProteinID:CDX79912ProteinID:CDX79912.1SEG:segSignalP:SignalP-noTMUniParc:UPI0004EEDE03MapMan:35.2
Description
BnaA05g02440D
Coordinates
chrLK031819:+:800649..804789
Molecular Weight (calculated)
48923.3 Da
IEP (calculated)
9.669
GRAVY (calculated)
0.070
Length
450 amino acids
Sequence
(BLAST)
001: MSLAISLCLA FLFALCHGSH SLPAQRTPHL DVLLPNGNFE QVPNKSNMRK RQIIGKHSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKRGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKAKF DVVKITFHNP GVQEDPSCGP LVDAVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFNNFSTGI LIPAKVQDLI SPLPGWIIES LKPVKYIDSR HFEVPSGLAA VELVAGRESA IAQIIRTVAG RNYMLSFAVG DAQNGCHGSM
301: MVEAFAGKAA FKLRFESNGK GAFKVGRFRF RADSNRTRLT FYSGFYHTKL HDFGHLCGPV LDSCKLHQTC YVIGYNINGG GGGGLGLDRI TNIQLNWCLF
401: LTYKKCLSTP LFAFSSSSLS AMVLTASNHA GLLILMGFSQ MATLSTSLPN
Best Arabidopsis Sequence Match ( AT2G41810.1 )
(BLAST)
001: MSLVLSLCLV FLCSLVHGSH SLPAQRTPHL DGLLPNGNFE QIPNKSNMRK RQIIGKYSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKSGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKATS DLVKVTFYNP GVQEDPTCGP IVDAVAIKEI LPLRYTKGNL
201: VKNGGFETGP HVFSNFSTGI LIPAKIQDLI SPLPGWIVES LKPVKYIDNR HFKVPSGLAA IELVAGRESA IAQIIRTVSG KNYILSFVVG DAHNGCHGSM
301: MVEAFAGISA FKVTFESNDK GAFKVGRFAF RADSNRTRIT FYSGFYHTKL HDFGHLCGPV LDNVSVFLAH
Arabidopsis Description
Uncharacterized protein At2g41810 [Source:UniProtKB/TrEMBL;Acc:O22939]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.