Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48764 | Canola | cytosol | 85.45 | 90.55 |
| Bra004650.1-P | Field mustard | extracellular | 99.53 | 57.14 |
| CDY14785 | Canola | extracellular, vacuole | 89.2 | 51.35 |
| AT2G41800.1 | Thale cress | extracellular, vacuole | 87.32 | 50.27 |
| CDY06908 | Canola | extracellular | 86.39 | 49.2 |
| VIT_08s0007g08460.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 68.54 | 39.78 |
| Os07t0206900-01 | Rice | cytosol, peroxisome | 17.84 | 38.78 |
| CDY48765 | Canola | extracellular | 79.81 | 38.37 |
| CDX79912 | Canola | extracellular, vacuole | 80.28 | 38.0 |
| CDX80516 | Canola | plastid | 51.17 | 35.62 |
| Solyc04g015610.2.1 | Tomato | extracellular | 61.5 | 35.5 |
| GSMUA_Achr9P25300_001 | Banana | extracellular, vacuole | 58.69 | 34.44 |
| CDY35979 | Canola | extracellular | 58.69 | 34.25 |
| CDY28002 | Canola | extracellular | 58.69 | 34.25 |
| CDY22149 | Canola | extracellular | 57.75 | 33.7 |
| EER93244 | Sorghum | extracellular, vacuole | 61.03 | 33.68 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 53.52 | 33.63 |
| Solyc04g015620.2.1 | Tomato | plastid | 58.22 | 33.51 |
| CDX75247 | Canola | golgi | 57.28 | 33.42 |
| CDX68849 | Canola | golgi | 56.34 | 32.88 |
| Os03t0807700-01 | Rice | plastid | 60.56 | 32.82 |
| CDX91217 | Canola | extracellular | 56.34 | 32.79 |
| CDX97108 | Canola | golgi | 55.87 | 32.51 |
| CDX85713 | Canola | extracellular | 55.87 | 32.51 |
| TraesCS5D01G469800.1 | Wheat | extracellular, vacuole | 60.09 | 32.24 |
| Zm00001d034547_P002 | Maize | extracellular, vacuole | 61.5 | 31.64 |
| CDX88180 | Canola | extracellular | 53.99 | 31.34 |
| CDX80511 | Canola | extracellular | 53.99 | 31.34 |
| CDY05493 | Canola | extracellular | 53.52 | 31.15 |
| CDY19801 | Canola | extracellular | 53.99 | 31.08 |
| HORVU5Hr1G109880.2 | Barley | golgi, vacuole | 59.62 | 30.46 |
| GSMUA_Achr6P29630_001 | Banana | cytosol, plastid | 45.07 | 30.38 |
| TraesCS5A01G458700.1 | Wheat | extracellular, golgi | 60.56 | 29.86 |
| CDY57694 | Canola | extracellular | 51.64 | 29.73 |
| CDY54317 | Canola | endoplasmic reticulum | 51.17 | 29.46 |
| CDX87297 | Canola | endoplasmic reticulum, extracellular | 44.13 | 27.49 |
| CDY39990 | Canola | extracellular | 42.72 | 26.69 |
| CDX99870 | Canola | plasma membrane | 40.38 | 22.05 |
| CDY17255 | Canola | plasma membrane | 40.38 | 21.5 |
| CDX84311 | Canola | plasma membrane | 40.38 | 21.5 |
| CDY26302 | Canola | extracellular, golgi, plasma membrane | 40.85 | 21.27 |
| CDX78563 | Canola | extracellular, plasma membrane | 34.74 | 19.22 |
| CDX70545 | Canola | extracellular, vacuole | 34.27 | 19.11 |
| PGSC0003DMT400081713 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 9.86 | 10.24 |
Protein Annotations
| EnsemblPlants:CDX79913 | EnsemblPlantsGene:GSBRNA2T00132768001 | Gene3D:2.60.120.260 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 |
| PANTHER:PTHR31265 | PANTHER:PTHR31265:SF5 | PFAM:PF04862 | ProteinID:CDX79913 | ProteinID:CDX79913.1 | UniParc:UPI0004EE9A90 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA05g02430D
Coordinates
chrLK031819:+:805125..805885
Molecular Weight (calculated)
23099.0 Da
IEP (calculated)
9.113
GRAVY (calculated)
0.099
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDVVKITFH NPGVQKDRTC GPLVDVVAIK EMIPLGYNRG GNLVKNGGFE IGPHVFANYS TGILIPARIQ DLISPLPGWI VESLKPVKYI DNRHFKVPSG
101: LAAVELVAGR ESAIAQIIRT VAGKAYTLSF TVGDAQNGCH GSMTVEAFAG KEPFKLSFVS EGKGVFKTGH FKFVADSDRT RLTFYSAFYH TKLHDFGHLC
201: GPVLDSVLVL PAH
101: LAAVELVAGR ESAIAQIIRT VAGKAYTLSF TVGDAQNGCH GSMTVEAFAG KEPFKLSFVS EGKGVFKTGH FKFVADSDRT RLTFYSAFYH TKLHDFGHLC
201: GPVLDSVLVL PAH
001: MSLYHSLSIF LLLSLCHGSY SLQPRRVPHL DGILPNGNFE ITPLKSNMKG RQIIGANSLP HWEIAGHVEL VSGGPQPGGF YFPVPRGVHA VRLGNLGTIS
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
Arabidopsis Description
At2g41800/T11A7.10 [Source:UniProtKB/TrEMBL;Acc:O22940]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.