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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • plastid 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:extracellular
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79913 Canola cytosol 57.14 99.53
CDY48764 Canola cytosol 50.67 93.53
Bra016917.1-P Field mustard extracellular 88.41 87.7
AT2G41800.1 Thale cress extracellular, vacuole 84.64 84.86
Bra004651.1-P Field mustard extracellular 79.25 79.46
VIT_08s0007g08460.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 64.69 65.4
Solyc04g015610.2.1 Tomato extracellular 58.76 59.08
GSMUA_Achr9P25300_001 Banana extracellular, vacuole 56.33 57.58
Solyc04g015620.2.1 Tomato plastid 56.6 56.76
Bra029693.1-P Field mustard extracellular 54.18 55.07
Bra040046.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 53.64 54.52
Bra023324.1-P Field mustard cytoskeleton, cytosol, peroxisome 49.33 53.82
PGSC0003DMT400081713 Potato endoplasmic reticulum, extracellular, plasma membrane 29.38 53.17
EER93244 Sorghum extracellular, vacuole 55.26 53.11
Bra011349.1-P Field mustard golgi 52.02 52.88
Os03t0807700-01 Rice plastid 54.72 51.65
TraesCS5D01G469800.1 Wheat extracellular, vacuole 54.18 50.63
Bra009841.1-P Field mustard extracellular 49.6 50.14
Bra020500.1-P Field mustard extracellular 48.79 49.45
Zm00001d034547_P002 Maize extracellular, vacuole 54.99 49.28
Bra003558.1-P Field mustard extracellular 48.79 49.05
Bra035192.1-P Field mustard extracellular 44.47 48.39
HORVU5Hr1G109880.2 Barley golgi, vacuole 53.91 47.96
TraesCS5A01G458700.1 Wheat extracellular, golgi 54.45 46.76
GSMUA_Achr6P29630_001 Banana cytosol, plastid 38.81 45.57
Os07t0206900-01 Rice cytosol, peroxisome 10.24 38.78
Bra005419.1-P Field mustard plasma membrane 40.43 37.5
Bra032349.1-P Field mustard extracellular, golgi, plasma membrane 40.97 37.16
Bra006241.1-P Field mustard extracellular, plasma membrane 29.38 28.31
Protein Annotations
EnsemblPlants:Bra004650.1EnsemblPlants:Bra004650.1-PEnsemblPlantsGene:Bra004650InterPro:DUF642PANTHER:PTHR31265PANTHER:PTHR31265:SF5
PFAM:PF04862SignalP:SignalP-noTMUniParc:UPI000254779AUniProt:M4CKB5MapMan:35.2:
Description
AT2G41800 (E=3e-186) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41810.1); Has 156 Blast hits to 155 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA05:-:1227575..1228901
Molecular Weight (calculated)
40135.4 Da
IEP (calculated)
8.773
GRAVY (calculated)
0.041
Length
371 amino acids
Sequence
(BLAST)
001: MSLYPTLCFL ILLSLCHGSH SVQPRRAPHL DGLLPNGNFE HIPPKSNMKG RQIIGAHSLP HWEISGHVEL VSGGLQPGGF HFAVPRGVHA IRLGSLASIS
101: QEVKVNRGFV YSITFGATRS CAQDENIKVS VPGQADELPI QTVFSSDGGD TYAWAFKAMS DVVKITFHNP GVQKDRTCGP LVDVVAIKEM LPLGYNRGGN
201: LVKNGGFEIG PHVFANYSTG ILIPARIQDL ISPLPGWIVE SLKPVKYIDN RHFKVPSGLA AVELVAGRES AIAQIIRTVA GKAYTLSFTV GDAQNGCHGS
301: MTVEAFAGKE PFKLSFVSEG KGVFKTGHFK FVADSDRTRL TFYSAFYHTK LHDFGHLCGP VLDSVLVLPA H
Best Arabidopsis Sequence Match ( AT2G41800.1 )
(BLAST)
001: MSLYHSLSIF LLLSLCHGSY SLQPRRVPHL DGILPNGNFE ITPLKSNMKG RQIIGANSLP HWEIAGHVEL VSGGPQPGGF YFPVPRGVHA VRLGNLGTIS
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
Arabidopsis Description
At2g41800/T11A7.10 [Source:UniProtKB/TrEMBL;Acc:O22940]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.