Factsheet for GSMUA_Achr9P25300_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0064g00460.t01	Wine grape	extracellular	67.77	68.33
PGSC0003DMT400017671	Potato	extracellular	68.04	67.3
Solyc01g087540.2.1	Tomato	extracellular	67.49	66.76
EER93244	Sorghum	extracellular, vacuole	69.7	65.54
CDY28002	Canola	extracellular	65.84	65.48
Bra029693.1-P	Field mustard	extracellular	65.56	65.21
CDY35979	Canola	extracellular	65.56	65.21
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	65.29	64.93
CDY22149	Canola	extracellular	65.29	64.93
Os03t0807700-01	Rice	plastid	69.7	64.38
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	55.92	64.24
VIT_08s0007g08460.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	64.46	63.76
AT3G08030.1	Thale cress	extracellular	63.91	63.56
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	68.32	62.47
KRH32968	Soybean	endoplasmic reticulum	63.09	62.4
KRH13974	Soybean	nucleus	62.53	61.85
Zm00001d034547_P002	Maize	extracellular, vacuole	68.87	60.39
AT2G41810.1	Thale cress	extracellular, vacuole	60.33	59.19
HORVU5Hr1G109880.2	Barley	golgi, vacuole	67.77	58.99
CDX79913	Canola	cytosol	34.44	58.69
KRH23881	Soybean	extracellular	57.02	58.64
AT2G41800.1	Thale cress	extracellular, vacuole	59.5	58.38
Bra004651.1-P	Field mustard	extracellular	59.5	58.38
CDY48764	Canola	cytosol	31.96	57.71
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	61.71	57.44
TraesCS5A01G458700.1	Wheat	extracellular, golgi	68.32	57.41
Bra016917.1-P	Field mustard	extracellular	58.95	57.22
CDY06908	Canola	extracellular	58.95	57.22
CDY14785	Canola	extracellular, vacuole	57.58	56.49
Bra004650.1-P	Field mustard	extracellular	57.58	56.33
PGSC0003DMT400081713	Potato	endoplasmic reticulum, extracellular, plasma membrane	30.85	54.63
Solyc04g015620.2.1	Tomato	plastid	55.65	54.59
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	54.27	53.68
GSMUA_Achr2P08300_001	Banana	extracellular	54.55	53.66
Solyc04g015610.2.1	Tomato	extracellular	54.55	53.66
GSMUA_Achr1P14570_001	Banana	extracellular	54.27	53.53
Os07t0206900-01	Rice	cytosol, peroxisome	14.05	52.04
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	51.52	50.95
CDY48765	Canola	extracellular	58.95	48.31
CDX79912	Canola	extracellular, vacuole	59.23	47.78
GSMUA_Achr4P15090_001	Banana	cytosol, endoplasmic reticulum, peroxisome	42.98	41.16
GSMUA_Achr3P31400_001	Banana	plasma membrane	46.28	37.5
GSMUA_Achr6P12280_001	Banana	cytosol, peroxisome, plasma membrane	15.98	27.75

Protein Annotations

EnsemblPlants:GSMUA_Achr9P25300_001	EnsemblPlants:GSMUA_Achr9T25300_001	EnsemblPlantsGene:GSMUA_Achr9G25300_001	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF2	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF49785	UniParc:UPI000296779F	UniProt:M0U3D7	MapMan:35.2	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G25300_001]

Coordinates

chr9:-:29842702..29844125

Molecular Weight (calculated)

38650.2 Da

IEP (calculated)

7.952

GRAVY (calculated)

-0.001

Length

363 amino acids

Sequence
(BLAST)

001: MGSLQLLLLL SFCIGVLGSL ELDGFLANGN FEISPRQDKL NKTVIQGKHS LPHWTIHGLV QYVSGGPQPG GMFFAVPHGV HAVRLGNDAS ISQNITVKPG
101: SLYALTFSAT RTCAQDEVLR VSVPPLSGDL PIQTLYSSTG GDTYAWGFRP GNKTVQVIFH NTGVQEDPAC GPLLDAVAIK ELFPPMPTHD NLVKNGGFEE
201: GPHVFKNSTT GVLLPPKQED STSPLPGWII ESLKAVRFID AAHYAIPSGQ FAIELVAGRE SAIAQVIRTA SNTTYNLSFV VGDAKNGCHG SMLVEAFAGN
301: GTAKVSFQSQ GKGGFKAASL NFTATGSRTR ITFYSSYYHT SVSNPGSLCG PLLDQVRVYP LKA

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.