CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G41810.1	Thale cress	extracellular, vacuole	74.49	89.19
CDX79912	Canola	extracellular, vacuole	83.07	81.78
CDY14785	Canola	extracellular, vacuole	67.04	80.27
CDX79913	Canola	cytosol	38.37	79.81
CDY06908	Canola	extracellular	65.91	78.07
CDY48764	Canola	cytosol	35.21	77.61
VIT_08s0007g08460.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	53.95	65.12
Solyc04g015610.2.1	Tomato	extracellular	50.34	60.43
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	48.31	58.95
Solyc04g015620.2.1	Tomato	plastid	48.53	58.11
CDY28002	Canola	extracellular	47.63	57.81
CDY35979	Canola	extracellular	47.4	57.53
CDY22149	Canola	extracellular	46.95	56.99
PGSC0003DMT400081713	Potato	endoplasmic reticulum, extracellular, plasma membrane	26.19	56.59
CDX97108	Canola	golgi	44.02	53.28
EER93244	Sorghum	extracellular, vacuole	46.05	52.85
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	40.41	52.8
CDX75247	Canola	golgi	42.89	52.05
CDX85713	Canola	extracellular	42.89	51.91
CDX68849	Canola	golgi	42.66	51.78
CDX91217	Canola	extracellular	42.66	51.64
Os03t0807700-01	Rice	plastid	45.37	51.15
CDX80511	Canola	extracellular	42.21	50.95
CDX88180	Canola	extracellular	42.21	50.95
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	45.37	50.63
CDY05493	Canola	extracellular	41.53	50.27
CDY19801	Canola	extracellular	41.76	50.0
Zm00001d034547_P002	Maize	extracellular, vacuole	45.82	49.03
HORVU5Hr1G109880.2	Barley	golgi, vacuole	45.15	47.96
CDY54317	Canola	endoplasmic reticulum	39.95	47.84
CDY57694	Canola	extracellular	39.95	47.84
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	33.63	47.15
CDX87297	Canola	endoplasmic reticulum, extracellular	36.34	47.08
CDY39990	Canola	extracellular	36.12	46.92
TraesCS5A01G458700.1	Wheat	extracellular, golgi	45.15	46.3
CDX80516	Canola	plastid	29.35	42.48
Os07t0206900-01	Rice	cytosol, peroxisome	8.58	38.78
CDY26302	Canola	extracellular, golgi, plasma membrane	33.63	36.43
CDX84311	Canola	plasma membrane	32.73	36.25
CDY17255	Canola	plasma membrane	32.73	36.25
CDX99870	Canola	plasma membrane	30.7	34.87
CDX78563	Canola	extracellular, plasma membrane	25.51	29.35
CDX70545	Canola	extracellular, vacuole	25.28	29.32

Protein Annotations

EnsemblPlants:CDY48765	EnsemblPlantsGene:GSBRNA2T00091672001	GO:A0A078ICX4	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF642	PANTHER:PTHR31265	PANTHER:PTHR31265:SF5	PFAM:PF04862	ProteinID:CDY48765	ProteinID:CDY48765.1
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EF2301	UniProt:A0A078ICX4	MapMan:35.2

Description

BnaC04g02180DBnaC04g02180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICX4]

Coordinates

chrLK032790:-:42425..46008

Molecular Weight (calculated)

49126.9 Da

IEP (calculated)

9.884

GRAVY (calculated)

0.103

Length

443 amino acids

Sequence
(BLAST)

001: MSLAISLCLA FLFALCHGSH SLPAQRTPHL DALLPNGNFE QVPNKSNMRE RQIIGKYSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKRGLV YSLTFGVTRS CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKAKF DVVKVTFHNP GVQEDPTCGP LVDAVAIKEI LPLRYTRGNF
201: VKNGGFEIGP HVFNNFSTGI LIPAKVQDLI SPLPGWIIES LKPVKYIDSR HFEVPSGLAA IELVAGRESA IAQIIRTIAG RNYVLSFAVG DAHNGCHGSM
301: MVEAFAGKAA FKLRFESNGK GAFKVGRFRF RADSNRTRLT FYSGFYHTKL HDFGHLCGPV LDNHISVNIH KVMVRFPITF IYIFNFCKSI FKITVLLLLA
401: YKKMSLYQTL CFLLILSLCH CSHSVQPRRA PHLDVGLLPK WQL

Best Arabidopsis Sequence Match ( AT2G41810.1 )
(BLAST)

001: MSLVLSLCLV FLCSLVHGSH SLPAQRTPHL DGLLPNGNFE QIPNKSNMRK RQIIGKYSLP HWEISGHVEL VSGGPQPGGF YFAVPRGVHA ARLGNLASIS
101: QYVKVKSGLV YSLTFGVTRT CAQDENIRIS VPGQTNELPI QTLFSTNGGD TYAWAFKATS DLVKVTFYNP GVQEDPTCGP IVDAVAIKEI LPLRYTKGNL
201: VKNGGFETGP HVFSNFSTGI LIPAKIQDLI SPLPGWIVES LKPVKYIDNR HFKVPSGLAA IELVAGRESA IAQIIRTVSG KNYILSFVVG DAHNGCHGSM
301: MVEAFAGISA FKVTFESNDK GAFKVGRFAF RADSNRTRIT FYSGFYHTKL HDFGHLCGPV LDNVSVFLAH

Arabidopsis Description

Uncharacterized protein At2g41810 [Source:UniProtKB/TrEMBL;Acc:O22939]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.