CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17255	Canola	plasma membrane	99.0	99.0
AT2G34510.1	Thale cress	vacuole	90.0	89.78
CDY26302	Canola	extracellular, golgi, plasma membrane	79.25	77.51
CDX99870	Canola	plasma membrane	75.5	77.44
Solyc02g070540.2.1	Tomato	endoplasmic reticulum, vacuole	71.75	73.4
PGSC0003DMT400054520	Potato	endoplasmic reticulum, vacuole	71.0	72.63
KRH11195	Soybean	endoplasmic reticulum	70.5	71.76
KRH21062	Soybean	endoplasmic reticulum	70.0	71.25
VIT_10s0003g03250.t01	Wine grape	extracellular, golgi, plasma membrane	69.75	71.17
Os01t0531400-00	Rice	cytosol	46.0	66.67
GSMUA_Achr4P15090_001	Banana	cytosol, endoplasmic reticulum, peroxisome	59.25	62.53
TraesCS3D01G294100.1	Wheat	plasma membrane	61.0	61.93
TraesCS3B01G328900.1	Wheat	plasma membrane	60.75	61.68
Os01t0756600-01	Rice	plasma membrane	61.5	61.65
TraesCS3A01G294300.1	Wheat	extracellular, golgi, plasma membrane	60.75	61.52
Zm00001d043414_P001	Maize	plasma membrane	60.75	61.21
EES01494	Sorghum	plasma membrane	60.25	60.55
GSMUA_Achr3P31400_001	Banana	plasma membrane	63.25	56.47
Zm00001d012718_P004	Maize	endoplasmic reticulum, plasma membrane	58.5	55.85
HORVU3Hr1G072860.3	Barley	plastid	59.0	51.98
CDX68849	Canola	golgi	44.75	49.04
CDX75247	Canola	golgi	44.25	48.49
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	40.25	47.49
CDX85713	Canola	extracellular	42.5	46.45
CDX91217	Canola	extracellular	42.5	46.45
CDX97108	Canola	golgi	42.0	45.9
CDY39990	Canola	extracellular	39.0	45.75
CDX87297	Canola	endoplasmic reticulum, extracellular	39.0	45.61
CDY05493	Canola	extracellular	41.25	45.08
CDX80511	Canola	extracellular	41.25	44.96
CDX88180	Canola	extracellular	41.25	44.96
CDY19801	Canola	extracellular	41.25	44.59
CDY54317	Canola	endoplasmic reticulum	41.0	44.32
CDY57694	Canola	extracellular	40.75	44.05
CDY35979	Canola	extracellular	38.75	42.47
CDY28002	Canola	extracellular	38.5	42.19
CDY22149	Canola	extracellular	38.25	41.92
CDX79913	Canola	cytosol	21.5	40.38
CDY14785	Canola	extracellular, vacuole	36.0	38.92
CDY48764	Canola	cytosol	19.25	38.31
CDY06908	Canola	extracellular	35.75	38.24
CDX80516	Canola	plastid	25.5	33.33
CDY48765	Canola	extracellular	36.25	32.73
CDX79912	Canola	extracellular, vacuole	36.5	32.44
CDX78563	Canola	extracellular, plasma membrane	29.25	30.39
CDX70545	Canola	extracellular, vacuole	28.75	30.1

Protein Annotations

EnsemblPlants:CDX84311	EnsemblPlantsGene:GSBRNA2T00141416001	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF1	PFAM:PF04862	ProteinID:CDX84311	ProteinID:CDX84311.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF49785	UniParc:UPI0004EE9127	MapMan:35.2	:	:

Description

BnaC04g10730D

Coordinates

chrLK031836:+:1743713..1747985

Molecular Weight (calculated)

43670.6 Da

IEP (calculated)

4.303

GRAVY (calculated)

-0.070

Length

400 amino acids

Sequence
(BLAST)

001: MVFYNNDSCK SVSTLMLLVG LCVFAAASDG KTSPVEDGLV VNGDFETPPS NGFPDDAMVQ DSTEIPSWRS DGTVELIKSG QKQGGMILIV PEGRHAVRLG
101: NDAEISQELA VEKGFIYSVT FSAARTCAQL ESLNVSVASD EPIASQTIDL QTLYSVQGWD PYAWAFEAVE DRVRLVFRNP GMEDDPTCGP IIDDIAVKKL
201: FTPDKPKGNA VVNGDFEEGP WMFRNTTLGV LLPTNLDEET SSLPGWTVES NRAVRFIDSD HFSVPEGKRA VELLSGKEGI ISQMVETKAN VPYKMSFSLG
301: HAGDKCKEPL AVMAFAGDQA QNFHYMAQAN SSFEVSELNF TAKADRTRIA FYSVYYNTRT DDMSSLCGPV IDDVRVWFSG SSRIGFGLPV LVLVLALVFI

Best Arabidopsis Sequence Match ( AT2G34510.1 )
(BLAST)

001: MMLYSNNSWR SNSILILLLG LSIVAAADSA GKTSPVEDGL VVNGDFETPP SNGFPDDAII EDTSEIPSWR SDGTVELIKS GQKQGGMILI VPEGRHAVRL
101: GNDAEISQEL TVEKGSIYSV TFSAARTCAQ LESLNVSVAS SDEPIASQTI DLQTVYSVQG WDPYAWAFEA VVDRVRLVFK NPGMEDDPTC GPIIDDIAVK
201: KLFTPDKPKG NAVINGDFEE GPWMFRNTTL GVLLPTNLDE EISSLPGWTV ESNRAVRFID SDHFSVPEGK RALELLSGKE GIISQMVETK ANIPYKMSFS
301: LGHAGDKCKE PLAVMAFAGD QAQNFHYMAQ ANSSFERSEL NFTAKAERTR IAFYSIYYNT RTDDMTSLCG PVIDDVKVWF SGSSRIGFSF PLFILLSLVF
401: I

Arabidopsis Description

Uncharacterized protein At2g34510 [Source:UniProtKB/TrEMBL;Acc:O64696]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.