Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0837300-02 | |
| Os04t0429800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G29980.1 | Os03t0837300-02 | AT2G23420.1 | 21798944 |
| AT1G29980.1 | Os04t0429800-01 | AT2G23420.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0756600-01 | Rice | plasma membrane | 99.28 | 68.67 |
| Zm00001d043414_P001 | Maize | plasma membrane | 91.3 | 63.48 |
| EES01494 | Sorghum | plasma membrane | 90.94 | 63.07 |
| TraesCS3B01G328900.1 | Wheat | plasma membrane | 89.86 | 62.94 |
| TraesCS3D01G294100.1 | Wheat | plasma membrane | 89.86 | 62.94 |
| TraesCS3A01G294300.1 | Wheat | extracellular, golgi, plasma membrane | 88.77 | 62.03 |
| Zm00001d012718_P004 | Maize | endoplasmic reticulum, plasma membrane | 89.49 | 58.95 |
| GSMUA_Achr4P15090_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 74.64 | 54.35 |
| HORVU3Hr1G072860.3 | Barley | plastid | 88.77 | 53.96 |
| KRH11195 | Soybean | endoplasmic reticulum | 71.01 | 49.87 |
| KRH21062 | Soybean | endoplasmic reticulum | 70.29 | 49.36 |
| VIT_10s0003g03250.t01 | Wine grape | extracellular, golgi, plasma membrane | 69.57 | 48.98 |
| GSMUA_Achr3P31400_001 | Banana | plasma membrane | 77.17 | 47.54 |
| PGSC0003DMT400054520 | Potato | endoplasmic reticulum, vacuole | 67.03 | 47.31 |
| Solyc02g070540.2.1 | Tomato | endoplasmic reticulum, vacuole | 66.67 | 47.06 |
| CDX99870 | Canola | plasma membrane | 65.58 | 46.41 |
| CDY17255 | Canola | plasma membrane | 66.67 | 46.0 |
| CDX84311 | Canola | plasma membrane | 66.67 | 46.0 |
| Bra005419.1-P | Field mustard | plasma membrane | 66.3 | 45.75 |
| CDY26302 | Canola | extracellular, golgi, plasma membrane | 67.75 | 45.72 |
| Bra032349.1-P | Field mustard | extracellular, golgi, plasma membrane | 67.39 | 45.48 |
| AT1G29980.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 67.03 | 45.45 |
| AT2G34510.1 | Thale cress | vacuole | 64.86 | 44.64 |
| Os07t0206900-01 | Rice | cytosol, peroxisome | 11.96 | 33.67 |
| Os02t0205200-01 | Rice | mitochondrion, nucleus, plastid | 42.39 | 32.05 |
| Os01t0611000-01 | Rice | extracellular | 41.67 | 30.83 |
| Os04t0494600-01 | Rice | extracellular | 41.67 | 30.5 |
| Os03t0807700-01 | Rice | plastid | 41.3 | 29.01 |
| Os04t0494950-01 | Rice | extracellular, vacuole | 38.41 | 28.49 |
| Os04t0494900-01 | Rice | extracellular | 38.77 | 28.38 |
| Os04t0495000-00 | Rice | extracellular, golgi, vacuole | 38.04 | 28.15 |
| Os02t0527500-00 | Rice | plastid | 11.23 | 23.66 |
| Os03t0328501-00 | Rice | plastid | 24.28 | 21.54 |
| Os04t0494800-01 | Rice | extracellular | 18.12 | 13.19 |
| Os07t0132600-00 | Rice | mitochondrion, nucleus, plastid | 16.67 | 12.6 |
Protein Annotations
| EnsemblPlants:Os01t0531400-00 | EnsemblPlantsGene:Os01g0531400 | Gene3D:2.60.120.260 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 |
| PANTHER:PTHR31265 | PANTHER:PTHR31265:SF1 | PFAM:PF04862 | ProteinID:BAS72512.1 | UniParc:UPI0003938E33 | UniProt:A0A0P0V3K7 |
| MapMan:35.2 | : | : | : | : | : |
Description
Hypothetical conserved gene. (Os01t0531400-00)
Coordinates
chr1:-:19129984..19131278
Molecular Weight (calculated)
29904.2 Da
IEP (calculated)
4.166
GRAVY (calculated)
-0.113
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: TCAQLESLNV SVLGGASQTV DLQTLYNIEG WDAYALAFQA TDEQASLEFR NPGMEDDPTC GPILDNVAIK KLFTPDKPKD NVVSNGDFEE GPWMFPNTSF
101: GVLLPTNLDE QTSALPGWMI ESNRAVRFVD SDQYTIPQGK RAIELLSGKE GIISQMVETT PQKEYSLTFT LGSAGDSCQP PMAVMAFAGD QAQNFHYSPM
201: GNATSQAANV TFTARAERTR VAFYSVYYNT RSDDHSSLCG PVIDDVRVWG LNGAAGLKAS IGLLLGIVSI VSLMLF
101: GVLLPTNLDE QTSALPGWMI ESNRAVRFVD SDQYTIPQGK RAIELLSGKE GIISQMVETT PQKEYSLTFT LGSAGDSCQP PMAVMAFAGD QAQNFHYSPM
201: GNATSQAANV TFTARAERTR VAFYSVYYNT RSDDHSSLCG PVIDDVRVWG LNGAAGLKAS IGLLLGIVSI VSLMLF
001: MTGLVINGDF ETSPSSGFPD DGVTDGPSDI PSWKSNGTVE LINSGQKQGG MILIVPQGRH AVRLGNDAEI SQDLTVEKGF VYSVTFSAAR TCAQLESINV
101: SVASVNADAD DMLASRNVDL QTLYSVQGWD PYAWAFEAED DHVRLVFKNP GMEDDPTCGP IIDDIAIKKL FTPDKPKDNA VINGDFEDGP WMFRNTSLGV
201: LLPTNLDEEI SSLPGWTVES NRAVRFVDSD HFSVPKGKRA VELLSGKEGI ISQMVETKAD KPYILSFSLG HAGDKCKEPL AIMAFAGDQA QNFHYMAQAN
301: SSFEKAGLNF TAKADRTRVA FYSVYYNTRT DDMSSLCGPV IDDVRVWFSG SKRIGAGFGF WVFVLLVVGL V
101: SVASVNADAD DMLASRNVDL QTLYSVQGWD PYAWAFEAED DHVRLVFKNP GMEDDPTCGP IIDDIAIKKL FTPDKPKDNA VINGDFEDGP WMFRNTSLGV
201: LLPTNLDEEI SSLPGWTVES NRAVRFVDSD HFSVPKGKRA VELLSGKEGI ISQMVETKAD KPYILSFSLG HAGDKCKEPL AIMAFAGDQA QNFHYMAQAN
301: SSFEKAGLNF TAKADRTRVA FYSVYYNTRT DDMSSLCGPV IDDVRVWFSG SKRIGAGFGF WVFVLLVVGL V
Arabidopsis Description
Uncharacterized protein T1P2.9 [Source:UniProtKB/TrEMBL;Acc:Q9C8S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.