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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus, plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0328501-00 Rice plastid 31.51 36.98
Os04t0494900-01 Rice extracellular 25.48 24.67
Zm00001d003186_P001 Maize extracellular 24.38 23.48
KXG26630 Sorghum extracellular 24.38 23.42
EES11052 Sorghum mitochondrion 24.11 23.22
TraesCS2D01G349700.1 Wheat endoplasmic reticulum, golgi, mitochondrion 23.01 22.16
TraesCS2B01G369700.1 Wheat endoplasmic reticulum, golgi 22.74 21.9
TraesCS2A01G351500.1 Wheat extracellular, golgi 22.19 21.37
Os04t0494950-01 Rice extracellular, vacuole 21.64 21.24
Os01t0611000-01 Rice extracellular 21.64 21.18
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 21.92 21.16
Os07t0206900-01 Rice cytosol, peroxisome 5.48 20.41
Os04t0495000-00 Rice extracellular, golgi, vacuole 20.82 20.38
Os04t0494600-01 Rice extracellular 20.55 19.89
Os04t0494800-01 Rice extracellular 20.27 19.53
Os02t0205200-01 Rice mitochondrion, nucleus, plastid 19.18 19.18
PGSC0003DMT400073682 Potato cytosol 17.53 19.1
GSMUA_Achr1P14570_001 Banana extracellular 19.18 19.02
CDX80516 Canola plastid 15.89 18.95
KRH16010 Soybean nucleus 18.63 18.58
GSMUA_Achr2P08300_001 Banana extracellular 18.63 18.43
PGSC0003DMT400073388 Potato mitochondrion 18.63 18.33
KRH05109 Soybean nucleus 18.36 18.31
Solyc06g067910.2.1 Tomato nucleus 18.63 18.28
VIT_04s0008g05010.t01 Wine grape extracellular, golgi 18.36 18.21
Bra023324.1-P Field mustard cytoskeleton, cytosol, peroxisome 16.71 17.94
PGSC0003DMT400014547 Potato extracellular 18.08 17.93
Bra011349.1-P Field mustard golgi 17.81 17.81
CDX75247 Canola golgi 17.81 17.81
AT4G32460.1 Thale cress endoplasmic reticulum, golgi 17.81 17.81
VIT_09s0002g05930.t01 Wine grape endoplasmic reticulum, extracellular 19.73 17.78
CDY54909 Canola cytoskeleton, cytosol, peroxisome 16.44 17.7
CDX68849 Canola golgi 17.53 17.53
PGSC0003DMT400074806 Potato extracellular 17.81 17.52
Solyc08g067030.2.1 Tomato extracellular 17.81 17.52
AT5G11420.1 Thale cress extracellular, golgi, vacuole 17.53 17.49
Solyc12g042930.1.1 Tomato endoplasmic reticulum, golgi 17.81 17.11
KRH52489 Soybean extracellular, golgi 17.26 17.03
AT5G25460.1 Thale cress endoplasmic reticulum, extracellular 16.99 16.8
CDY19801 Canola extracellular 16.99 16.76
KRH52488 Soybean extracellular 16.71 16.71
Os01t0531400-00 Rice cytosol 12.6 16.67
CDX85713 Canola extracellular 16.71 16.67
CDX97108 Canola golgi 16.71 16.67
CDY05493 Canola extracellular 16.44 16.39
Bra020500.1-P Field mustard extracellular 16.44 16.39
CDX91217 Canola extracellular 16.44 16.39
CDX88180 Canola extracellular 16.44 16.35
CDX80511 Canola extracellular 16.44 16.35
Bra009841.1-P Field mustard extracellular 16.44 16.35
KRH09784 Soybean nucleus 16.44 16.04
KRH23537 Soybean nucleus 16.44 16.04
KRH44408 Soybean golgi 18.08 15.1
Os03t0807700-01 Rice plastid 15.89 14.76
Os01t0756600-01 Rice plasma membrane 12.88 11.78
Solyc03g120040.2.1 Tomato extracellular, nucleus 8.22 11.63
Os02t0527500-00 Rice plastid 1.37 3.82
Protein Annotations
EnsemblPlants:Os07t0132600-00EnsemblPlantsGene:Os07g0132600PANTHER:PTHR31265PANTHER:PTHR31265:SF7ProteinID:BAS99940.1SEG:seg
UniParc:UPI0003939D40UniProt:A0A0P0X2P9MapMan:35.2:::
Description
Similar to OSIGBa0103O01.10 protein. (Os07t0132600-00)
Coordinates
chr7:+:1715637..1716780
Molecular Weight (calculated)
39006.9 Da
IEP (calculated)
10.567
GRAVY (calculated)
-0.660
Length
365 amino acids
Sequence
(BLAST)
001: PRSATTGPIP ARGCGSGPTR GRWRGDPAAT RPRWRRAEAS CRSRALLAAL PSESCWVPPM DEDDYSSLSP WMILSTTKSV KYIDTAHYAV PGGARVVELV
101: TGMETAMVQE VSTVPGLSYR LEFSVGDAGD GRSGSLTVQA YACGDERGGR RGGGRRRAAL LACCYAVRRG GRLSAEEKAD VGATATAVRS IDGRTAIAAA
201: SGGVAAMGNP TAAPSATPSS RGLLLGRPAR PTRSSWPRRR WPWRLRQALR VVPSSRWLAR EGEAGHTVDV VAAEEEDAGH RSVAGSGRGG GGDEEDTDNH
301: YGNADDHHAH QPPRARTPPP PPAAQPCSPP PVLATPLPQR EVKKKRKKER GKREMTWHAD TWVPR
Best Arabidopsis Sequence Match ( AT4G32460.3 )
(BLAST)
001: MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS
101: GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI
201: DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA
301: MRNDDFSSLC GPVIDDVKLL SARRP
Arabidopsis Description
At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.