Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073682 | Potato | cytosol | 84.74 | 96.12 |
| Solyc06g067910.2.1 | Tomato | nucleus | 78.68 | 80.38 |
| Solyc03g120040.2.1 | Tomato | extracellular, nucleus | 54.21 | 79.84 |
| KRH09784 | Soybean | nucleus | 65.0 | 66.04 |
| KRH23537 | Soybean | nucleus | 64.47 | 65.51 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 67.37 | 63.21 |
| GSMUA_Achr7P08400_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 60.79 | 62.94 |
| Solyc08g067030.2.1 | Tomato | extracellular | 61.05 | 62.53 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 60.53 | 62.5 |
| GSMUA_Achr2P17020_001 | Banana | endoplasmic reticulum, vacuole | 60.26 | 62.4 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 59.47 | 61.25 |
| TraesCS7A01G453100.1 | Wheat | golgi | 55.79 | 57.3 |
| TraesCS7B01G353600.2 | Wheat | extracellular | 55.79 | 57.3 |
| KXG29757 | Sorghum | golgi | 56.05 | 57.26 |
| TraesCS6A01G177500.1 | Wheat | extracellular | 56.05 | 56.95 |
| HORVU6Hr1G037000.1 | Barley | extracellular | 56.05 | 56.95 |
| TraesCS7D01G442500.1 | Wheat | golgi | 55.26 | 56.76 |
| TraesCS6B01G207200.1 | Wheat | extracellular | 55.79 | 56.68 |
| TraesCS6D01G166800.1 | Wheat | extracellular, golgi, vacuole | 50.53 | 56.47 |
| Os02t0205200-01 | Rice | mitochondrion, nucleus, plastid | 54.21 | 56.44 |
| Os01t0611000-01 | Rice | extracellular | 55.26 | 56.3 |
| KRH44408 | Soybean | golgi | 64.21 | 55.84 |
| OQU87155 | Sorghum | golgi | 54.74 | 55.47 |
| Zm00001d044455_P001 | Maize | plasma membrane | 54.21 | 54.07 |
| Zm00001d003186_P001 | Maize | extracellular | 53.68 | 53.83 |
| TraesCS2A01G434700.1 | Wheat | golgi | 52.63 | 53.62 |
| TraesCS2B01G455800.1 | Wheat | golgi | 52.63 | 53.62 |
| TraesCS2D01G432500.1 | Wheat | extracellular, golgi | 52.63 | 53.62 |
| Os04t0494900-01 | Rice | extracellular | 53.16 | 53.58 |
| EES11052 | Sorghum | mitochondrion | 53.16 | 53.3 |
| TraesCS2B01G369800.1 | Wheat | extracellular | 52.11 | 52.8 |
| OQU81862 | Sorghum | cytosol, endoplasmic reticulum, golgi, mitochondrion | 54.21 | 52.55 |
| TraesCS2A01G351600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 52.11 | 52.52 |
| TraesCS2D01G349800.1 | Wheat | mitochondrion | 52.11 | 52.52 |
| TraesCS2A01G351700.1 | Wheat | extracellular | 50.26 | 52.33 |
| Zm00001d003183_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 52.11 | 52.11 |
| EES11053 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 51.58 | 51.99 |
| Os04t0494600-01 | Rice | extracellular | 51.58 | 51.99 |
| HORVU2Hr1G085440.1 | Barley | extracellular | 51.58 | 51.85 |
| TraesCS2D01G349900.1 | Wheat | extracellular | 49.74 | 51.78 |
| Os04t0494950-01 | Rice | extracellular, vacuole | 50.53 | 51.61 |
| Zm00001d003184_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 48.68 | 51.53 |
| TraesCS2B01G369900.1 | Wheat | extracellular | 49.47 | 51.51 |
| EES11054 | Sorghum | extracellular, vacuole | 50.79 | 51.06 |
| TraesCS5D01G395400.1 | Wheat | extracellular | 50.53 | 50.79 |
| TraesCS5A01G385400.1 | Wheat | extracellular | 50.26 | 50.66 |
| Os04t0495000-00 | Rice | extracellular, golgi, vacuole | 49.21 | 50.13 |
| TraesCS2A01G351400.1 | Wheat | extracellular | 49.74 | 50.13 |
| TraesCS2B01G369700.1 | Wheat | endoplasmic reticulum, golgi | 50.0 | 50.13 |
| HORVU2Hr1G085430.1 | Barley | endoplasmic reticulum, golgi | 49.74 | 50.0 |
| KXG26630 | Sorghum | extracellular | 50.0 | 50.0 |
| TraesCS2D01G349700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 49.74 | 49.87 |
| TraesCS5B01G390400.1 | Wheat | plastid | 40.26 | 49.84 |
| Solyc01g087540.2.1 | Tomato | extracellular | 47.89 | 49.59 |
| TraesCS2B01G369500.1 | Wheat | cytosol | 46.58 | 49.44 |
| TraesCS2A01G351500.1 | Wheat | extracellular, golgi | 49.21 | 49.34 |
| TraesCS2D01G349500.1 | Wheat | extracellular | 48.68 | 49.07 |
| HORVU5Hr1G094750.2 | Barley | extracellular | 49.74 | 48.96 |
| Os02t0527500-00 | Rice | plastid | 16.84 | 48.85 |
| TraesCS2A01G421300.1 | Wheat | extracellular | 47.89 | 47.27 |
| TraesCS2B01G440300.1 | Wheat | extracellular | 47.63 | 47.14 |
| TraesCS2D01G349200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.84 | 46.97 |
| TraesCS2A01G351200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.84 | 46.97 |
| Zm00001d003187_P002 | Maize | endoplasmic reticulum, plasma membrane | 48.95 | 46.85 |
| TraesCS2B01G369300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.32 | 46.44 |
| Solyc04g015610.2.1 | Tomato | extracellular | 44.21 | 45.53 |
| Solyc04g015620.2.1 | Tomato | plastid | 43.95 | 45.14 |
| Zm00001d025754_P001 | Maize | golgi | 48.42 | 45.1 |
| KXG26629 | Sorghum | golgi | 48.68 | 44.69 |
| Solyc02g070540.2.1 | Tomato | endoplasmic reticulum, vacuole | 45.0 | 43.73 |
| HORVU2Hr1G085370.2 | Barley | endoplasmic reticulum | 43.16 | 43.16 |
| HORVU2Hr1G085340.2 | Barley | mitochondrion, plastid | 48.68 | 37.0 |
| Zm00001d015715_P001 | Maize | plasma membrane | 55.26 | 35.84 |
| Os03t0328501-00 | Rice | plastid | 26.32 | 32.15 |
| HORVU2Hr1G085520.2 | Barley | extracellular | 30.0 | 31.23 |
| Zm00001d003185_P001 | Maize | extracellular | 51.84 | 28.47 |
| Os04t0494800-01 | Rice | extracellular | 19.74 | 19.79 |
| Os07t0132600-00 | Rice | mitochondrion, nucleus, plastid | 17.11 | 17.81 |
Protein Annotations
| EnsemblPlants:Solyc12g042930.1.1 | EnsemblPlantsGene:Solyc12g042930.1 | Gene3D:2.60.120.260 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 |
| PANTHER:PTHR31265 | PANTHER:PTHR31265:SF9 | PFAM:PF04862 | SEG:seg | SignalP:SignalP-TM | UniParc:UPI0002769437 |
| UniProt:K4DF82 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:39500951..39503937
Molecular Weight (calculated)
41994.5 Da
IEP (calculated)
7.204
GRAVY (calculated)
-0.176
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAMKMKKV VIVLVILCAT LQIGSSLIDG LLPNGNFEQG PKSSQMKNTR VIDPHAIPHW ELSGYVEYIK SGQMQGDMLL PVPQGDYAVR LGEGASLKTK
101: VTSVTKGTFY SLSFVFARTC AQEERLNVSV SPNSEPKDWG MLPLQTMYSS DGWDTYSWGF LAEANEIDIV LHNPIAHEKD PACGPLIDFV ALKALKTTHR
201: PKDNMLKNGN FEEGPYIFPN TSWGVLIPPN IEDDHCPLPG WIVESLKAVK YVDADHFTVP EGKRAIELVA GRESAIAQQV ITKTGRIYDL IFSVGDANNA
301: CEGSMVVEAF AGNVALQFQY VSKGKGGFKR AKLRFTAMSQ RTRVRFLSSY YHMKSDNSGS LCGPVIDDVR LVSVRNPRIP
101: VTSVTKGTFY SLSFVFARTC AQEERLNVSV SPNSEPKDWG MLPLQTMYSS DGWDTYSWGF LAEANEIDIV LHNPIAHEKD PACGPLIDFV ALKALKTTHR
201: PKDNMLKNGN FEEGPYIFPN TSWGVLIPPN IEDDHCPLPG WIVESLKAVK YVDADHFTVP EGKRAIELVA GRESAIAQQV ITKTGRIYDL IFSVGDANNA
301: CEGSMVVEAF AGNVALQFQY VSKGKGGFKR AKLRFTAMSQ RTRVRFLSSY YHMKSDNSGS LCGPVIDDVR LVSVRNPRIP
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Arabidopsis Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.