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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G349900.1 Wheat extracellular 60.27 60.27
TraesCS2B01G369900.1 Wheat extracellular 60.0 60.0
TraesCS2A01G351700.1 Wheat extracellular 59.73 59.73
HORVU2Hr1G085370.2 Barley endoplasmic reticulum 41.92 40.26
HORVU2Hr1G085440.1 Barley extracellular 40.82 39.42
Os04t0495000-00 Rice extracellular, golgi, vacuole 40.27 39.41
EES11053 Sorghum endoplasmic reticulum, extracellular, vacuole 40.27 38.99
Solyc03g120040.2.1 Tomato extracellular, nucleus 26.58 37.6
GSMUA_Achr1P14570_001 Banana extracellular 36.16 35.87
GSMUA_Achr2P08300_001 Banana extracellular 35.34 34.96
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 36.16 34.92
CDX75247 Canola golgi 34.25 34.25
Bra011349.1-P Field mustard golgi 34.25 34.25
CDX68849 Canola golgi 33.97 33.97
AT4G32460.1 Thale cress endoplasmic reticulum, golgi 33.42 33.42
Bra020500.1-P Field mustard extracellular 33.42 33.33
CDY05493 Canola extracellular 33.42 33.33
Bra023324.1-P Field mustard cytoskeleton, cytosol, peroxisome 30.96 33.24
Solyc06g067910.2.1 Tomato nucleus 33.7 33.06
CDY54909 Canola cytoskeleton, cytosol, peroxisome 30.68 33.04
VIT_04s0008g05010.t01 Wine grape extracellular, golgi 33.15 32.88
KRH05109 Soybean nucleus 32.88 32.79
PGSC0003DMT400073388 Potato mitochondrion 33.15 32.61
AT5G11420.1 Thale cress extracellular, golgi, vacuole 32.6 32.51
CDX91217 Canola extracellular 32.6 32.51
KRH16010 Soybean nucleus 32.33 32.24
CDX85713 Canola extracellular 32.33 32.24
CDY19801 Canola extracellular 32.6 32.16
Bra009841.1-P Field mustard extracellular 32.33 32.15
CDX80511 Canola extracellular 32.33 32.15
CDX88180 Canola extracellular 32.33 32.15
PGSC0003DMT400014547 Potato extracellular 32.33 32.07
CDX97108 Canola golgi 32.05 31.97
Solyc08g067030.2.1 Tomato extracellular 32.33 31.81
PGSC0003DMT400074806 Potato extracellular 32.33 31.81
AT5G25460.1 Thale cress endoplasmic reticulum, extracellular 32.05 31.71
HORVU5Hr1G094750.2 Barley extracellular 33.15 31.35
KRH52489 Soybean extracellular, golgi 31.51 31.08
KRH23537 Soybean nucleus 31.78 31.02
KRH09784 Soybean nucleus 31.78 31.02
HORVU6Hr1G037000.1 Barley extracellular 31.78 31.02
KRH52488 Soybean extracellular 30.96 30.96
Solyc12g042930.1.1 Tomato endoplasmic reticulum, golgi 31.23 30.0
PGSC0003DMT400073682 Potato cytosol 27.4 29.85
VIT_09s0002g05930.t01 Wine grape endoplasmic reticulum, extracellular 32.88 29.63
HORVU2Hr1G085340.2 Barley mitochondrion, plastid 33.97 24.8
KRH44408 Soybean golgi 28.77 24.03
HORVU5Hr1G109880.2 Barley golgi, vacuole 23.84 20.86
HORVU3Hr1G072860.3 Barley plastid 24.66 19.82
CDX80516 Canola plastid 13.7 16.34
Protein Annotations
EnsemblPlants:HORVU2Hr1G085520.2EnsemblPlantsGene:HORVU2Hr1G085520InterPro:DUF642InterPro:Galactose-bd-like_sfInterPro:IPR008979ncoils:Coil
PANTHER:PTHR31265PANTHER:PTHR31265:SF8PFAM:PF04862SEG:segSignalP:SignalP-noTMSUPFAM:SSF49785
TMHMM:TMhelixUniParc:UPI000B47FC6AUniProt:A0A287IRA6MapMan:35.2::
Description
No Description!
Coordinates
chrchr2H:-:618208985..618211755
Molecular Weight (calculated)
25933.1 Da
IEP (calculated)
6.945
GRAVY (calculated)
0.023
Length
365 amino acids
Sequence
(BLAST)
001: MATSMRWIAL FLLVDVCALA VSAVIDDGLL PNGDFRNGPD KSQMNGPVVT GKHAIPNWEL SGFVEYIESG HTQEDMILPV PVGANAVRLG NDATIRQQLK
101: VSRHTYYSIS FIAARSCAQA EKLNVSVDPE FGVLPIQTVY TNTGWDTYSW AFKPRHSTVW LSIHNTGIEE NPACGPLLIA VAIKTLYPHV YNRXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXAKLEFTA IADKTRVVFQ SSNHHTVNAT LCGPVVDDVW LVRLK
Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)
001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG
Arabidopsis Description
At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.