Factsheet for TraesCS2D01G349900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G369900.1	Wheat	extracellular	95.62	95.62
TraesCS2A01G351700.1	Wheat	extracellular	94.52	94.52
TraesCS2D01G432500.1	Wheat	extracellular, golgi	73.97	72.39
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	67.12	64.99
Os04t0495000-00	Rice	extracellular, golgi, vacuole	66.03	64.61
TraesCS2D01G349800.1	Wheat	mitochondrion	64.11	62.07
HORVU2Hr1G085520.2	Barley	extracellular	60.27	60.27
TraesCS7D01G442500.1	Wheat	golgi	60.82	60.0
GSMUA_Achr1P14570_001	Banana	extracellular	58.08	57.61
GSMUA_Achr2P08300_001	Banana	extracellular	57.26	56.64
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	57.81	55.67
TraesCS2D01G349500.1	Wheat	extracellular	56.71	54.91
TraesCS5D01G395400.1	Wheat	extracellular	56.71	54.76
Solyc03g120040.2.1	Tomato	extracellular, nucleus	38.63	54.65
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	50.68	54.41
CDX75247	Canola	golgi	53.97	53.97
Bra011349.1-P	Field mustard	golgi	53.97	53.97
PGSC0003DMT400014547	Potato	extracellular	54.25	53.8
Solyc06g067910.2.1	Tomato	nucleus	54.79	53.76
CDX68849	Canola	golgi	53.7	53.7
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	49.86	53.69
PGSC0003DMT400073388	Potato	mitochondrion	54.52	53.64
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.15	53.15
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	53.15	52.72
CDY05493	Canola	extracellular	52.6	52.46
Bra020500.1-P	Field mustard	extracellular	52.6	52.46
PGSC0003DMT400073682	Potato	cytosol	47.95	52.24
KRH05109	Soybean	nucleus	52.33	52.19
CDX85713	Canola	extracellular	52.33	52.19
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	52.33	52.19
PGSC0003DMT400074806	Potato	extracellular	52.88	52.02
CDX97108	Canola	golgi	52.05	51.91
CDX91217	Canola	extracellular	52.05	51.91
Solyc08g067030.2.1	Tomato	extracellular	52.6	51.75
KRH16010	Soybean	nucleus	51.78	51.64
CDY19801	Canola	extracellular	52.05	51.35
CDX88180	Canola	extracellular	51.51	51.23
CDX80511	Canola	extracellular	51.51	51.23
Bra009841.1-P	Field mustard	extracellular	51.51	51.23
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	51.51	50.95
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.88	50.92
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	47.12	50.59
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	51.78	49.74
KRH09784	Soybean	nucleus	50.96	49.73
KRH23537	Soybean	nucleus	50.68	49.47
KRH52489	Soybean	extracellular, golgi	50.14	49.46
KRH52488	Soybean	extracellular	49.04	49.04
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	53.97	48.64
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	43.29	39.8
KRH44408	Soybean	golgi	47.12	39.36
CDX80516	Canola	plastid	32.05	38.24
TraesCS3D01G294100.1	Wheat	plasma membrane	40.0	37.06

Protein Annotations

EnsemblPlants:TraesCS2D01G349900.1	EnsemblPlantsGene:TraesCS2D01G349900	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
TMHMM:TMhelix	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:447318989..447322782

Molecular Weight (calculated)

39900.9 Da

IEP (calculated)

7.054

GRAVY (calculated)

-0.006

Length

365 amino acids

Sequence
(BLAST)

001: MATSMRWIAL FLLVAVSALA VSAVIEDGLL PNGDFRNGPD KSQMNGPVVA GKYAIPNWEL SGFVEYIESG HTQDDMILPV PVGANAVRLG NDATIRQQLK
101: VARHTYYSIS FIAARSCAQE EKLNVSVDPE FGMIPIQTVY TNTGWDTYSW AFKPRHSTVW LSIHNTGIEE NPACGPLIIA VAIKTLYPQL YNKGNMVKNG
201: DFEQGPYIFS NTPWGVLVPP IFEDVHSPLP GWMIMSDTKV VKYIDAQHHA VPKGARAVEL VAGVEVALVQ EVPGTVPGRS YRLSFSIGDA RNGCVGSLGV
301: DVYAAREKLR VSYESRGTGG HKCAKLEFTA IADKTRVVFQ SSNHHTVNAT LCGPVVDDVW LVRIK

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.