Factsheet for TraesCS2D01G349800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	96.29	96.29
TraesCS2B01G369800.1	Wheat	extracellular	94.96	95.47
HORVU2Hr1G085440.1	Barley	extracellular	95.49	95.24
Os04t0494950-01	Rice	extracellular, vacuole	73.21	74.19
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	71.62	68.88
TraesCS7D01G442500.1	Wheat	golgi	66.84	68.11
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	68.17	67.63
TraesCS2D01G432500.1	Wheat	extracellular, golgi	66.84	67.56
EES11054	Sorghum	extracellular, vacuole	66.58	66.4
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	61.27	64.35
TraesCS2D01G349900.1	Wheat	extracellular	62.07	64.11
TraesCS5D01G395400.1	Wheat	extracellular	61.8	61.64
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	61.8	61.48
GSMUA_Achr1P14570_001	Banana	extracellular	59.42	60.87
GSMUA_Achr2P08300_001	Banana	extracellular	58.62	59.89
TraesCS2D01G349500.1	Wheat	extracellular	59.68	59.68
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	52.79	58.7
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	51.99	57.65
Solyc03g120040.2.1	Tomato	extracellular, nucleus	39.26	57.36
PGSC0003DMT400074806	Potato	extracellular	55.97	56.87
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	55.44	56.79
Solyc08g067030.2.1	Tomato	extracellular	55.7	56.6
PGSC0003DMT400014547	Potato	extracellular	55.17	56.52
CDY05493	Canola	extracellular	54.11	55.74
CDX91217	Canola	extracellular	54.11	55.74
Bra020500.1-P	Field mustard	extracellular	54.11	55.74
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	54.11	55.74
PGSC0003DMT400073388	Potato	mitochondrion	54.64	55.53
KRH16010	Soybean	nucleus	53.58	55.19
KRH05109	Soybean	nucleus	53.58	55.19
CDX97108	Canola	golgi	53.58	55.19
CDX85713	Canola	extracellular	53.58	55.19
Solyc06g067910.2.1	Tomato	nucleus	54.38	55.11
Bra009841.1-P	Field mustard	extracellular	53.58	55.04
CDX88180	Canola	extracellular	53.58	55.04
CDX80511	Canola	extracellular	53.58	55.04
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	55.17	54.88
CDY19801	Canola	extracellular	53.85	54.86
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.05	54.79
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	53.32	54.47
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	49.07	54.41
PGSC0003DMT400073682	Potato	cytosol	48.28	54.33
Bra011349.1-P	Field mustard	golgi	52.52	54.25
CDX75247	Canola	golgi	52.52	54.25
CDX68849	Canola	golgi	52.52	54.25
KRH52489	Soybean	extracellular, golgi	53.05	54.05
KRH52488	Soybean	extracellular	51.99	53.7
KRH23537	Soybean	nucleus	52.79	53.21
KRH09784	Soybean	nucleus	52.79	53.21
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	56.76	52.84
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	52.52	52.11
KRH44408	Soybean	golgi	51.72	44.62
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	44.56	42.32
CDX80516	Canola	plastid	33.69	41.5
TraesCS3D01G294100.1	Wheat	plasma membrane	40.85	39.09
Zm00001d003185_P001	Maize	extracellular	67.37	36.71

Protein Annotations

EnsemblPlants:TraesCS2D01G349800.1	EnsemblPlantsGene:TraesCS2D01G349800	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:447160387..447162507

Molecular Weight (calculated)

40645.0 Da

IEP (calculated)

8.959

GRAVY (calculated)

-0.015

Length

377 amino acids

Sequence
(BLAST)

001: MGMAEGMRRR CMTLLVLVGV AARAVSAVTD GLLPNGNFKD GPAKSQLNGT VVMGRHSIPN WEISGFVEYI QSGHQQGGMV VAVPEGASAV RLGNDASIRQ
101: NIRVTRRAYY SITFSAARTC AQAEKLNVSV AADSGVLPVQ TVYSSGGWDS YSWAFRAKHS AVWLAIHNPG AEEDPACGPV IDAIAIKTLQ PPTKSKGNML
201: RNGDFEDGPY IFPDCPWGVL VPPMDEDSCS PLPGWMIMSS TKVVKYVDAP RYRVPHGARA VELVAGREAA LVQEVATVAG RSYRLQFYVG DAANGCKESM
301: VVEAYVAAAS LKVQYQSQGT GGYRRAMLDF VAVGNLTRVV FQSLHYHMKV DGTLCGPVVD DISLVSVRKR AARRLLM

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.