Factsheet for Zm00001d003183_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, extracellular

Predictor Summary:

plastid 2
extracellular 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	82.89	87.74
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	87.37	84.69
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	68.95	69.5
Os04t0494950-01	Rice	extracellular, vacuole	66.84	68.28
TraesCS2D01G349800.1	Wheat	mitochondrion	67.63	68.17
TraesCS2B01G369800.1	Wheat	extracellular	67.11	68.0
HORVU2Hr1G085440.1	Barley	extracellular	67.11	67.46
Zm00001d003186_P001	Maize	extracellular	62.11	62.27
Zm00001d044455_P001	Maize	plasma membrane	61.58	61.42
GSMUA_Achr1P14570_001	Banana	extracellular	57.63	59.51
GSMUA_Achr2P08300_001	Banana	extracellular	57.63	59.35
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	52.63	58.82
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	51.58	57.82
PGSC0003DMT400074806	Potato	extracellular	56.32	57.68
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	55.79	57.61
Solyc08g067030.2.1	Tomato	extracellular	56.05	57.41
CDX91217	Canola	extracellular	55.26	57.38
CDX85713	Canola	extracellular	54.74	56.83
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	54.47	56.71
KRH16010	Soybean	nucleus	54.47	56.56
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	54.47	56.56
CDY05493	Canola	extracellular	54.47	56.56
Bra020500.1-P	Field mustard	extracellular	54.47	56.56
KRH05109	Soybean	nucleus	54.21	56.28
CDX75247	Canola	golgi	53.95	56.16
CDX68849	Canola	golgi	53.95	56.16
Bra011349.1-P	Field mustard	golgi	53.95	56.16
PGSC0003DMT400014547	Potato	extracellular	54.21	55.98
CDY19801	Canola	extracellular	54.47	55.95
Solyc06g067910.2.1	Tomato	nucleus	54.74	55.91
Bra009841.1-P	Field mustard	extracellular	53.95	55.86
CDX88180	Canola	extracellular	53.95	55.86
CDX80511	Canola	extracellular	53.95	55.86
PGSC0003DMT400073388	Potato	mitochondrion	54.21	55.53
CDX97108	Canola	golgi	53.42	55.46
Solyc03g120040.2.1	Tomato	extracellular, nucleus	37.37	55.04
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	53.42	55.01
PGSC0003DMT400073682	Potato	cytosol	48.16	54.63
KRH09784	Soybean	nucleus	52.63	53.48
KRH23537	Soybean	nucleus	52.37	53.21
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	52.11	52.11
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	55.26	51.85
KRH52489	Soybean	extracellular, golgi	50.26	51.62
KRH52488	Soybean	extracellular	49.21	51.23
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	52.63	50.38
Zm00001d025754_P001	Maize	golgi	51.84	48.28
KRH44408	Soybean	golgi	50.0	43.48
Zm00001d043414_P001	Maize	plasma membrane	42.11	40.3
CDX80516	Canola	plastid	31.32	38.89
Zm00001d034547_P002	Maize	extracellular, vacuole	41.32	37.92
Zm00001d003185_P001	Maize	extracellular	67.11	36.85
Zm00001d012718_P004	Maize	endoplasmic reticulum, plasma membrane	39.74	36.04
Zm00001d015715_P001	Maize	plasma membrane	53.68	34.81

Protein Annotations

EnsemblPlants:Zm00001d003183_P001	EnsemblPlants:Zm00001d003183_T001	EnsemblPlantsGene:Zm00001d003183	EntrezGene:103646275	Gene3D:2.60.120.260	InterPro:DUF642
InterPro:Galactose-bd-like_sf	InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	ProteinID:ONM16321.1
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785	UniParc:UPI000221B43D	UniProt:A0A1D6E7A4	MapMan:35.2

Description

No Description!

Coordinates

chr2:-:34929927..34931427

Molecular Weight (calculated)

40913.0 Da

IEP (calculated)

6.860

GRAVY (calculated)

-0.076

Length

380 amino acids

Sequence
(BLAST)

001: MQLIRREPQT SMAGGTRSRC PVLLLLLLGV TTARLASGVV TDGLLPNGNF ELGPAKSDLN GTRVMNQNSV PNWEIFGFVE YIGSGQKQDD MILAVPEGAC
101: AVRLGNDATI RQKLEVIRKT TYSITFCAAR TCAQAERLNV SVAAESGVLP IQTVYTSSGW DSYAYAFRAR HSTAWFSIHN PGHEDNPACG PLIDFIAIKA
201: LNPPPLAQGN MLRNGDFEEG PFIFPDTAWG VLVPPMSEDD VSPLPGWMVM SDTKVVKYVD AAHHAVPRGA RAVELVAGRE AALVQDVRTV PGRRYRLSLS
301: VGDAANGCEG PMAVEAYAAR ATLRTTYESL GKGGSRRAAV EFEATANLTR VVLQSYNHHM KPDGTLCGPV VDDVSLVGLR

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.