Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG26629 | Sorghum | golgi | 86.15 | 82.61 |
| Zm00001d025754_P001 | Maize | golgi | 83.63 | 81.37 |
| Os04t0494600-01 | Rice | extracellular | 59.19 | 62.33 |
| TraesCS5B01G390400.1 | Wheat | plastid | 47.1 | 60.91 |
| TraesCS2B01G369500.1 | Wheat | cytosol | 54.41 | 60.34 |
| TraesCS5A01G385400.1 | Wheat | extracellular | 56.93 | 59.95 |
| TraesCS2A01G351400.1 | Wheat | extracellular | 56.93 | 59.95 |
| TraesCS5D01G395400.1 | Wheat | extracellular | 56.93 | 59.79 |
| TraesCS2D01G349500.1 | Wheat | extracellular | 56.17 | 59.15 |
| HORVU5Hr1G094750.2 | Barley | extracellular | 57.43 | 59.07 |
| Zm00001d003186_P001 | Maize | extracellular | 55.67 | 58.31 |
| TraesCS2B01G440300.1 | Wheat | extracellular | 54.16 | 55.99 |
| TraesCS2A01G351200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 53.15 | 55.67 |
| TraesCS2B01G369300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 52.64 | 55.15 |
| TraesCS2D01G349200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 52.39 | 54.88 |
| TraesCS2A01G421300.1 | Wheat | extracellular | 53.15 | 54.81 |
| HORVU2Hr1G085370.2 | Barley | endoplasmic reticulum | 51.39 | 53.68 |
| Zm00001d044455_P001 | Maize | plasma membrane | 51.39 | 53.54 |
| Solyc03g120040.2.1 | Tomato | extracellular, nucleus | 34.26 | 52.71 |
| Zm00001d003183_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 50.38 | 52.63 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 48.87 | 52.57 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 48.61 | 52.45 |
| Zm00001d003184_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 47.1 | 52.09 |
| PGSC0003DMT400074806 | Potato | extracellular | 48.61 | 52.02 |
| PGSC0003DMT400073388 | Potato | mitochondrion | 48.61 | 52.02 |
| Solyc08g067030.2.1 | Tomato | extracellular | 48.36 | 51.75 |
| Solyc06g067910.2.1 | Tomato | nucleus | 48.36 | 51.61 |
| Bra023324.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 43.83 | 51.18 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 47.36 | 51.09 |
| PGSC0003DMT400014547 | Potato | extracellular | 47.36 | 51.09 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 42.82 | 50.15 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 45.84 | 49.73 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 45.59 | 49.59 |
| PGSC0003DMT400073682 | Potato | cytosol | 41.81 | 49.55 |
| KRH09784 | Soybean | nucleus | 46.35 | 49.2 |
| KRH05109 | Soybean | nucleus | 45.34 | 49.18 |
| Solyc12g042930.1.1 | Tomato | endoplasmic reticulum, golgi | 46.85 | 48.95 |
| KRH16010 | Soybean | nucleus | 45.09 | 48.91 |
| CDX97108 | Canola | golgi | 45.09 | 48.91 |
| KRH23537 | Soybean | nucleus | 45.84 | 48.66 |
| CDX91217 | Canola | extracellular | 44.84 | 48.63 |
| CDX85713 | Canola | extracellular | 44.84 | 48.63 |
| Bra020500.1-P | Field mustard | extracellular | 44.58 | 48.36 |
| CDY05493 | Canola | extracellular | 44.58 | 48.36 |
| CDX80511 | Canola | extracellular | 44.33 | 47.96 |
| CDX88180 | Canola | extracellular | 44.33 | 47.96 |
| Bra009841.1-P | Field mustard | extracellular | 44.33 | 47.96 |
| CDX75247 | Canola | golgi | 43.83 | 47.67 |
| CDX68849 | Canola | golgi | 43.83 | 47.67 |
| Bra011349.1-P | Field mustard | golgi | 43.83 | 47.67 |
| KRH52488 | Soybean | extracellular | 43.58 | 47.4 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 43.83 | 47.15 |
| CDY19801 | Canola | extracellular | 43.83 | 47.03 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 47.86 | 46.91 |
| KRH52489 | Soybean | extracellular, golgi | 43.58 | 46.76 |
| HORVU2Hr1G085340.2 | Barley | mitochondrion, plastid | 57.43 | 45.6 |
| KRH44408 | Soybean | golgi | 44.84 | 40.73 |
| Zm00001d043414_P001 | Maize | plasma membrane | 37.53 | 37.53 |
| CDX80516 | Canola | plastid | 28.72 | 37.25 |
| Zm00001d034547_P002 | Maize | extracellular, vacuole | 38.54 | 36.96 |
| Zm00001d012718_P004 | Maize | endoplasmic reticulum, plasma membrane | 34.51 | 32.7 |
| Zm00001d015715_P001 | Maize | plasma membrane | 46.85 | 31.74 |
| Zm00001d003185_P001 | Maize | extracellular | 51.89 | 29.77 |
Protein Annotations
| EnsemblPlants:Zm00001d003187_P002 | EnsemblPlants:Zm00001d003187_T002 | EnsemblPlantsGene:Zm00001d003187 | EntrezGene:103646278 | Gene3D:2.60.120.260 | InterPro:DUF642 |
| InterPro:Galactose-bd-like_sf | InterPro:IPR008979 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF11 | PFAM:PF04862 | ProteinID:ONM16325.1 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF49785 | UniParc:UPI000221B417 | UniProt:A0A1D6E7A9 | MapMan:35.2 |
Description
No Description!
Coordinates
chr2:-:35035423..35037644
Molecular Weight (calculated)
42196.4 Da
IEP (calculated)
4.545
GRAVY (calculated)
-0.141
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDERSVHG GAALVLRLLV CVVAARAVSA VADGPLLNGN FEDPPNQSQM SGSVVTGEHA VSYWKTSGHI EFICSGQKQG DMVLTVPDGS HALRLGSGAS
101: IQQQISLTKG LYYSLTFSAS RTCSQNEMLN VTAAPVSGSP AQTGELPTQT VYTSSGWDSY SWAFRAEAGL MSITVTHNCG EEEDPACGPI VDAFAIKTLS
201: QPEASQNNML RNGDFEEGPY IPPDSQWGVL VPPVDEDDVS PLPGWNIMAY KKSVKYIDSA HFAVPRGARA VELVSGVETA LLQEVYTTVE GSWYRLEFSA
301: GDADGCASSY DDGSSSGMKV KAYAGTAETT VDVDFRDAGG SKRGKIEFRA TASPTRVVFV SLGYHTKSDN SGTLCGPVVD DVSLVPIPQP YARRLLL
101: IQQQISLTKG LYYSLTFSAS RTCSQNEMLN VTAAPVSGSP AQTGELPTQT VYTSSGWDSY SWAFRAEAGL MSITVTHNCG EEEDPACGPI VDAFAIKTLS
201: QPEASQNNML RNGDFEEGPY IPPDSQWGVL VPPVDEDDVS PLPGWNIMAY KKSVKYIDSA HFAVPRGARA VELVSGVETA LLQEVYTTVE GSWYRLEFSA
301: GDADGCASSY DDGSSSGMKV KAYAGTAETT VDVDFRDAGG SKRGKIEFRA TASPTRVVFV SLGYHTKSDN SGTLCGPVVD DVSLVPIPQP YARRLLL
001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG
Arabidopsis Description
At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.