Factsheet for Zm00001d044455_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
golgi 6
plasma membrane 4
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

extracellular: 20408568
plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87155	Sorghum	golgi	90.55	92.0
Os01t0611000-01	Rice	extracellular	85.56	87.4
TraesCS7B01G353600.2	Wheat	extracellular	81.36	83.78
TraesCS7A01G453100.1	Wheat	golgi	81.1	83.51
TraesCS7D01G442500.1	Wheat	golgi	81.1	83.51
GSMUA_Achr1P14570_001	Banana	extracellular	65.88	68.21
GSMUA_Achr2P08300_001	Banana	extracellular	65.35	67.48
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	64.83	67.12
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	58.27	65.29
Zm00001d003186_P001	Maize	extracellular	63.78	64.12
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	56.96	64.01
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	60.37	62.84
PGSC0003DMT400074806	Potato	extracellular	60.89	62.53
Solyc08g067030.2.1	Tomato	extracellular	60.89	62.53
KRH16010	Soybean	nucleus	59.84	62.3
KRH05109	Soybean	nucleus	59.84	62.3
CDX91217	Canola	extracellular	59.58	62.02
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	59.32	61.92
Bra009841.1-P	Field mustard	extracellular	59.58	61.85
CDX80511	Canola	extracellular	59.58	61.85
CDX88180	Canola	extracellular	59.58	61.85
CDX85713	Canola	extracellular	59.32	61.75
CDX75247	Canola	golgi	59.06	61.64
Bra011349.1-P	Field mustard	golgi	59.06	61.64
CDY19801	Canola	extracellular	59.84	61.62
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	61.42	61.58
CDX68849	Canola	golgi	58.79	61.37
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	57.74	61.28
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	59.32	61.25
CDX97108	Canola	golgi	58.79	61.2
CDY05493	Canola	extracellular	58.27	60.66
Bra020500.1-P	Field mustard	extracellular	58.27	60.66
KRH52489	Soybean	extracellular, golgi	58.27	60.0
Solyc03g120040.2.1	Tomato	extracellular, nucleus	40.42	59.69
Solyc06g067910.2.1	Tomato	nucleus	58.27	59.68
PGSC0003DMT400073388	Potato	mitochondrion	57.48	59.03
PGSC0003DMT400014547	Potato	extracellular	56.69	58.7
KRH52488	Soybean	extracellular	56.17	58.63
KRH23537	Soybean	nucleus	57.22	58.29
KRH09784	Soybean	nucleus	57.22	58.29
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	61.68	58.02
PGSC0003DMT400073682	Potato	cytosol	48.82	55.52
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	54.07	54.21
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	53.54	51.39
Zm00001d025754_P001	Maize	golgi	53.81	50.25
KRH44408	Soybean	golgi	54.59	47.6
CDX80516	Canola	plastid	37.8	47.06
Zm00001d034547_P002	Maize	extracellular, vacuole	45.93	42.27
Zm00001d043414_P001	Maize	plasma membrane	43.57	41.81
Zm00001d015715_P001	Maize	plasma membrane	59.06	38.4
Zm00001d012718_P004	Maize	endoplasmic reticulum, plasma membrane	40.68	36.99
Zm00001d003185_P001	Maize	extracellular	61.42	33.81

Protein Annotations

EntrezGene:100279506	Gene3D:2.60.120.260	MapMan:35.2	UniProt:B4FRA6	EMBL:BT039644	EMBL:BT042600
EMBL:BT042819	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979	ProteinID:ONM41221.1	PFAM:PF04862
PANTHER:PTHR31265	PANTHER:PTHR31265:SF12	SUPFAM:SSF49785	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00017B7E2A
EnsemblPlantsGene:Zm00001d044455	EnsemblPlants:Zm00001d044455_P001	EnsemblPlants:Zm00001d044455_T001	SEG:seg	:	:

Description

OSJNBb0091E11.19 protein

Coordinates

chr3:+:228435563..228439044

Molecular Weight (calculated)

40525.7 Da

IEP (calculated)

9.065

GRAVY (calculated)

0.039

Length

381 amino acids

Sequence
(BLAST)

001: MRRVALLLVA AVCALAAPAA AVVTDGLLPN GNFEDGPPKS ALVNGTVVSG AHAIPRWETS GFVEYIESGH KQGDMLLVVP QGAHAVRLGN EASIRQRLAV
101: ARGAYYAITF SAARTCAQAE RQRLNVSVSP EWGVLPMQTI YGSNGWDSYA WAFKAKMDAV TLVIHNPGVE EDPACGPLID GVAIRALYPP ALARRAGGNN
201: LLKNGGFEEG PYFLPGASWG VLVPPNIEDD HSPLPAWMIV SSKAVKYVDA AHFAVPQGAR AVELVGGRES ALVQEVRTVP GWTYRLAFAV GDSGDGCAGS
301: MAAEAYAARA TVKVPYQSRG TGGYKRAVLD FTAIANRTRV VFQSTFYHMK PDGTLCGPLV DDASLVGLRK KKPARRLMQL L

Best Arabidopsis Sequence Match ( AT5G25460.1 )
(BLAST)

001: MEGVTVVSFF LLFIATAMAA KSTVSFRDGM LPNGDFELGP KPSDMKGTEI LNKLAIPNWE VTGFVEYIKS GHKQGDMLLV VPAGKFAVRL GNEASIKQRL
101: KVVKGMYYSL TFSAARTCAQ DERLNISVAP DSGVIPIQTV YSSSGWDLYA WAFQAESDVA EVVIHNPGVE EDPACGPLID GVAMRSLYPP RPTNKNILKN
201: GGFEEGPLVL PGSTTGVLIP PFIEDDHSPL PGWMVESLKA VKYVDVEHFS VPQGRRAIEL VAGKESAIAQ VVRTVIGKTY VLSFAVGDAN NACKGSMVVE
301: AFAGKDTLKV PYESKGTGGF KRASIRFVAV STRSRIMFYS TFYAMRSDDF SSLCGPVIDD VKLISVRKP

Arabidopsis Description

At5g25460 [Source:UniProtKB/TrEMBL;Acc:Q94F20]
SUBAcon: [extracellular,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.