Factsheet for Zm00001d025754_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
golgi 6
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	81.37	83.63
KXG26629	Sorghum	golgi	79.41	78.26
TraesCS5B01G390400.1	Wheat	plastid	46.08	61.24
Os04t0494600-01	Rice	extracellular	55.15	59.68
TraesCS2A01G351400.1	Wheat	extracellular	54.41	58.89
TraesCS2B01G369500.1	Wheat	cytosol	51.47	58.66
TraesCS5A01G385400.1	Wheat	extracellular	53.92	58.36
TraesCS5D01G395400.1	Wheat	extracellular	53.92	58.2
TraesCS2D01G349500.1	Wheat	extracellular	53.43	57.82
HORVU5Hr1G094750.2	Barley	extracellular	54.41	57.51
TraesCS2B01G440300.1	Wheat	extracellular	53.92	57.29
Zm00001d003186_P001	Maize	extracellular	52.94	56.99
TraesCS2A01G421300.1	Wheat	extracellular	52.94	56.1
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.23	55.15
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.49	54.35
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.25	54.09
Zm00001d044455_P001	Maize	plasma membrane	50.25	53.81
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	48.77	52.37
GSMUA_Achr1P14570_001	Banana	extracellular	47.06	52.17
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	45.83	52.09
GSMUA_Achr2P08300_001	Banana	extracellular	47.06	52.03
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	48.28	51.84
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	42.4	50.88
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	45.83	50.82
Solyc03g120040.2.1	Tomato	extracellular, nucleus	32.11	50.78
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	42.16	50.74
PGSC0003DMT400073388	Potato	mitochondrion	46.08	50.67
PGSC0003DMT400014547	Potato	extracellular	45.34	50.27
Solyc06g067910.2.1	Tomato	nucleus	45.83	50.27
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	44.61	49.86
KRH09784	Soybean	nucleus	45.59	49.73
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	44.61	49.73
PGSC0003DMT400073682	Potato	cytosol	40.44	49.25
KRH23537	Soybean	nucleus	45.1	49.2
PGSC0003DMT400074806	Potato	extracellular	44.61	49.06
CDY05493	Canola	extracellular	43.87	48.91
Bra020500.1-P	Field mustard	extracellular	43.87	48.91
Solyc08g067030.2.1	Tomato	extracellular	44.36	48.79
Bra009841.1-P	Field mustard	extracellular	43.87	48.77
CDX88180	Canola	extracellular	43.87	48.77
CDX80511	Canola	extracellular	43.87	48.77
Bra011349.1-P	Field mustard	golgi	43.63	48.77
CDX68849	Canola	golgi	43.63	48.77
CDX75247	Canola	golgi	43.63	48.77
CDY19801	Canola	extracellular	44.12	48.65
CDX97108	Canola	golgi	43.63	48.63
CDX91217	Canola	extracellular	43.63	48.63
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	45.1	48.42
KRH05109	Soybean	nucleus	43.38	48.36
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	43.63	48.24
KRH16010	Soybean	nucleus	43.14	48.09
CDX85713	Canola	extracellular	43.14	48.09
KRH52488	Soybean	extracellular	42.65	47.67
KRH52489	Soybean	extracellular, golgi	42.89	47.3
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	45.83	46.17
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	54.66	44.6
KRH44408	Soybean	golgi	43.63	40.73
Zm00001d034547_P002	Maize	extracellular, vacuole	38.73	38.16
CDX80516	Canola	plastid	28.43	37.91
Zm00001d043414_P001	Maize	plasma membrane	35.54	36.52
Zm00001d012718_P004	Maize	endoplasmic reticulum, plasma membrane	33.58	32.7
Zm00001d015715_P001	Maize	plasma membrane	45.59	31.74
Zm00001d003185_P001	Maize	extracellular	51.23	30.2

Protein Annotations

EnsemblPlants:Zm00001d025754_P001	EnsemblPlants:Zm00001d025754_T001	EnsemblPlantsGene:Zm00001d025754	EntrezGene:103641799	Gene3D:2.60.120.260	InterPro:DUF642
InterPro:Galactose-bd-like_sf	InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	ProteinID:AQK44502.1
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000221786F	UniProt:K7TQE7	MapMan:35.2

Description

No Description!

Coordinates

chr10:+:128451529..128454075

Molecular Weight (calculated)

42521.9 Da

IEP (calculated)

4.574

GRAVY (calculated)

-0.078

Length

408 amino acids

Sequence
(BLAST)

001: MVIDRRSVQR AALVVLPLVL FVAARAVSAV GDGPLQNGNF EDSPDQSQMS GSVVAGEHAI SGWKTSGHIE LVCSGQKQGD MVLTVPDGAQ ALRLGAGASI
101: EQQISGLTQG SYYSLTFAAS RTCSQDETLS VTAAPAPSGA GSPAPAQTGE LPMQTVYTSI GWDSYSWAFR AEGAGLMSVV ITHNCGQEED PACGPIVDAF
201: AIKALHDQPP DQAAADNNML RNGGFEEGPY IPPGSPWGVL VPPVDEDPVS PLPGWKVMAY KKSVRYVDSA HFAVPRGARA VELVSGVEAA LLQEVDTTVE
301: GSWYRLEFSA GDAANGCASS SDGSSSSGMK LKAYAGTSET TVDIDFRGAG GSNRGKIEFR AAASPTRVVF VSLGYHTKSD NSGTLCGPVV DDVSLVPIPP
401: PYARRLLL

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.