Factsheet for TraesCS2B01G369500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G351400.1	Wheat	extracellular	93.02	88.33
TraesCS2D01G349500.1	Wheat	extracellular	92.74	88.06
TraesCS5B01G390400.1	Wheat	plastid	69.83	81.43
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	89.66	64.2
Os04t0494600-01	Rice	extracellular	66.2	62.86
TraesCS2B01G440300.1	Wheat	extracellular	66.2	61.72
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	63.41	59.89
TraesCS2B01G369800.1	Wheat	extracellular	62.01	59.2
GSMUA_Achr1P14570_001	Banana	extracellular	59.22	57.61
TraesCS7B01G353600.2	Wheat	extracellular	58.94	57.03
GSMUA_Achr2P08300_001	Banana	extracellular	58.38	56.64
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	59.78	56.46
TraesCS2B01G369900.1	Wheat	extracellular	57.54	56.44
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	51.96	54.71
TraesCS2B01G455800.1	Wheat	golgi	56.7	54.42
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	60.34	54.41
KXG26629	Sorghum	golgi	61.73	53.38
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	50.0	52.8
PGSC0003DMT400074806	Potato	extracellular	54.47	52.56
Solyc08g067030.2.1	Tomato	extracellular	54.47	52.56
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	52.79	51.78
Zm00001d025754_P001	Maize	golgi	58.66	51.47
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	52.51	51.37
KRH05109	Soybean	nucleus	52.51	51.37
KRH16010	Soybean	nucleus	52.51	51.37
CDY19801	Canola	extracellular	53.07	51.35
CDX68849	Canola	golgi	52.23	51.23
Bra009841.1-P	Field mustard	extracellular	52.51	51.23
CDX80511	Canola	extracellular	52.51	51.23
CDX88180	Canola	extracellular	52.51	51.23
CDX85713	Canola	extracellular	52.23	51.09
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	52.51	51.09
Bra011349.1-P	Field mustard	golgi	51.96	50.96
CDX75247	Canola	golgi	51.96	50.96
CDX91217	Canola	extracellular	51.96	50.82
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	52.23	50.68
CDX97108	Canola	golgi	51.4	50.27
Bra020500.1-P	Field mustard	extracellular	51.4	50.27
CDY05493	Canola	extracellular	51.4	50.27
KRH09784	Soybean	nucleus	52.23	50.0
KRH23537	Soybean	nucleus	52.23	50.0
TraesCS6B01G207200.1	Wheat	extracellular	51.96	49.73
Solyc06g067910.2.1	Tomato	nucleus	51.4	49.46
PGSC0003DMT400014547	Potato	extracellular	50.84	49.46
PGSC0003DMT400073388	Potato	mitochondrion	51.12	49.33
PGSC0003DMT400073682	Potato	cytosol	45.81	48.96
KRH52489	Soybean	extracellular, golgi	50.56	48.92
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	54.75	48.4
Solyc03g120040.2.1	Tomato	extracellular, nucleus	34.64	48.06
KRH52488	Soybean	extracellular	48.6	47.67
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	49.44	46.58
KRH44408	Soybean	golgi	50.28	41.19
CDX80516	Canola	plastid	32.68	38.24
TraesCS3B01G328900.1	Wheat	plasma membrane	41.06	37.31

Protein Annotations

EnsemblPlants:TraesCS2B01G369500.1	EnsemblPlantsGene:TraesCS2B01G369500	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
ncoils:Coil	PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	SEG:seg	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:526776238..526777410

Molecular Weight (calculated)

38467.5 Da

IEP (calculated)

7.390

GRAVY (calculated)

-0.210

Length

358 amino acids

Sequence
(BLAST)

001: MQTAGPLLNG NFEYAPNRSQ MNGSRVMGKY AIPYWKVAGF VEYIESGAKQ DHMVLIVPEG RHAVRLGTES SIQQQLSVTR GKYYSITFSA ARTCAQSEKL
101: SVSIVPGDAS GGELPVQTVY TSSGWDSYAW AFKAKQGVVS LIIHHGDDQV DDPACGPIVD AVAIRTLSPP HATHQNMLIN GDFEEGPYMT PGSPSGVLVP
201: PMDEDATSPL PGWTIMSHSK VVKYIDAGHF RVPHGSRAVE LVAGVEVALV QEVATVPGRS YRLQFSVGDA GNKCAASPMS VQVATAYGGK RVSYESRGTG
301: GYVRDKLDFK AEGNSTRVVF YSTGYHTTSD RSGTLCGPVV DDVSLVSVSH PHARRLLR

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.