Factsheet for TraesCS2B01G369800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G349800.1	Wheat	mitochondrion	95.47	94.96
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	95.47	94.96
HORVU2Hr1G085440.1	Barley	extracellular	93.33	92.59
Os04t0494950-01	Rice	extracellular, vacuole	73.6	74.19
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	72.27	69.13
TraesCS7B01G353600.2	Wheat	extracellular	66.67	67.57
TraesCS2B01G455800.1	Wheat	golgi	66.93	67.29
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	68.0	67.11
EES11054	Sorghum	extracellular, vacuole	66.67	66.14
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	61.33	64.07
TraesCS5B01G390400.1	Wheat	plastid	51.73	63.19
TraesCS2B01G369900.1	Wheat	extracellular	61.33	63.01
TraesCS2B01G369500.1	Wheat	cytosol	59.2	62.01
GSMUA_Achr1P14570_001	Banana	extracellular	60.27	61.41
GSMUA_Achr2P08300_001	Banana	extracellular	59.47	60.43
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	60.0	59.37
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	53.33	59.0
Solyc03g120040.2.1	Tomato	extracellular, nucleus	40.0	58.14
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	52.53	57.94
PGSC0003DMT400074806	Potato	extracellular	57.07	57.68
Solyc08g067030.2.1	Tomato	extracellular	56.8	57.41
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	55.73	56.79
PGSC0003DMT400014547	Potato	extracellular	55.73	56.79
Bra020500.1-P	Field mustard	extracellular	54.93	56.28
CDY05493	Canola	extracellular	54.93	56.28
CDX91217	Canola	extracellular	54.67	56.01
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	54.67	56.01
TraesCS6B01G207200.1	Wheat	extracellular	55.73	55.88
PGSC0003DMT400073388	Potato	mitochondrion	55.2	55.8
CDX80511	Canola	extracellular	54.4	55.59
CDX88180	Canola	extracellular	54.4	55.59
Bra009841.1-P	Field mustard	extracellular	54.4	55.59
CDX85713	Canola	extracellular	54.13	55.46
KRH16010	Soybean	nucleus	54.13	55.46
CDX97108	Canola	golgi	54.13	55.46
KRH05109	Soybean	nucleus	54.13	55.46
Solyc06g067910.2.1	Tomato	nucleus	54.93	55.38
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.87	55.34
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	55.73	55.15
CDY19801	Canola	extracellular	54.4	55.14
CDX68849	Canola	golgi	53.6	55.07
Bra011349.1-P	Field mustard	golgi	53.6	55.07
CDX75247	Canola	golgi	53.6	55.07
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	54.13	55.01
PGSC0003DMT400073682	Potato	cytosol	48.53	54.33
KRH52489	Soybean	extracellular, golgi	52.8	53.51
KRH52488	Soybean	extracellular	52.0	53.42
TraesCS2B01G440300.1	Wheat	extracellular	54.67	53.39
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	57.6	53.33
KRH23537	Soybean	nucleus	53.07	53.21
KRH09784	Soybean	nucleus	53.07	53.21
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	52.8	52.11
KRH44408	Soybean	golgi	52.0	44.62
CDX80516	Canola	plastid	34.13	41.83
TraesCS3B01G328900.1	Wheat	plasma membrane	41.33	39.34
Zm00001d003185_P001	Maize	extracellular	67.73	36.71

Protein Annotations

EnsemblPlants:TraesCS2B01G369800.1	EnsemblPlantsGene:TraesCS2B01G369800	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:526843992..526845877

Molecular Weight (calculated)

40426.7 Da

IEP (calculated)

8.545

GRAVY (calculated)

0.005

Length

375 amino acids

Sequence
(BLAST)

001: MGMGMQCRCM TLLVLVGVAA RAVSAVTDGL LPNGNFKDGP AKSQLNGTVV MGRHSIPNWE ISGFVEYIQS GHQQGGMIVA VPEGASAVRL GNDASIRQNI
101: GVTRRAYYSI TFSAARTCAQ AEKLNVSVAA DSGVLPVQTV YSSGGWDSYS WAFRAKHSAV WLTIHNPGVE EDPACGPVID AIAIKTLQPP TKTKGNMLRN
201: GDFEDGPYIF PDCPWGVLVP PMDEDNCSPL PGWMIMSSTK VVKYVDAPRY RVPHGARAVE LVAGRETALV QEVATVAGRS YRLQFYVGDA ANGCKESMVV
301: EAFVAAANLK VQYQSQGTGG YRRAILDFVA VGNLTRVVFQ SLHHHMKVDG TLCGPVVDDM SLVSVRKRAA RRLFM

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.