Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81862 | Sorghum | cytosol, endoplasmic reticulum, golgi, mitochondrion | 71.69 | 69.13 |
| Os04t0494950-01 | Rice | extracellular, vacuole | 67.72 | 68.82 |
| EES11053 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 67.72 | 67.9 |
| TraesCS2B01G369800.1 | Wheat | extracellular | 66.14 | 66.67 |
| TraesCS2D01G349800.1 | Wheat | mitochondrion | 66.4 | 66.58 |
| TraesCS2A01G351600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 65.87 | 66.05 |
| HORVU2Hr1G085440.1 | Barley | extracellular | 65.34 | 65.34 |
| EES11052 | Sorghum | mitochondrion | 63.23 | 63.06 |
| OQU87155 | Sorghum | golgi | 62.43 | 62.93 |
| KXG26630 | Sorghum | extracellular | 62.96 | 62.63 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 57.94 | 59.51 |
| Bra023324.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 52.65 | 58.53 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 56.61 | 57.99 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 55.56 | 57.07 |
| Solyc03g120040.2.1 | Tomato | extracellular, nucleus | 38.36 | 56.2 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 50.26 | 56.05 |
| KXG29757 | Sorghum | golgi | 54.76 | 55.65 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 53.7 | 55.62 |
| PGSC0003DMT400074806 | Potato | extracellular | 53.97 | 54.99 |
| Solyc08g067030.2.1 | Tomato | extracellular | 53.97 | 54.99 |
| KRH16010 | Soybean | nucleus | 53.17 | 54.92 |
| KRH05109 | Soybean | nucleus | 53.17 | 54.92 |
| CDX85713 | Canola | extracellular | 52.91 | 54.64 |
| PGSC0003DMT400014547 | Potato | extracellular | 53.17 | 54.62 |
| CDX91217 | Canola | extracellular | 52.65 | 54.37 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 52.38 | 54.1 |
| CDX75247 | Canola | golgi | 52.12 | 53.97 |
| CDX68849 | Canola | golgi | 52.12 | 53.97 |
| Bra011349.1-P | Field mustard | golgi | 52.12 | 53.97 |
| CDX97108 | Canola | golgi | 51.85 | 53.55 |
| PGSC0003DMT400073388 | Potato | mitochondrion | 52.38 | 53.37 |
| Solyc06g067910.2.1 | Tomato | nucleus | 52.38 | 53.23 |
| PGSC0003DMT400073682 | Potato | cytosol | 47.09 | 53.13 |
| KRH09784 | Soybean | nucleus | 52.38 | 52.94 |
| CDY05493 | Canola | extracellular | 51.06 | 52.73 |
| Bra020500.1-P | Field mustard | extracellular | 51.06 | 52.73 |
| Bra009841.1-P | Field mustard | extracellular | 51.06 | 52.59 |
| CDX88180 | Canola | extracellular | 51.06 | 52.59 |
| CDX80511 | Canola | extracellular | 51.06 | 52.59 |
| KRH23537 | Soybean | nucleus | 51.85 | 52.41 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 55.29 | 51.6 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 50.26 | 51.49 |
| KXG26629 | Sorghum | golgi | 56.35 | 51.45 |
| CDY19801 | Canola | extracellular | 50.26 | 51.35 |
| KRH52488 | Soybean | extracellular | 49.21 | 50.96 |
| KRH52489 | Soybean | extracellular, golgi | 49.74 | 50.81 |
| Solyc12g042930.1.1 | Tomato | endoplasmic reticulum, golgi | 51.06 | 50.79 |
| Zm00001d003185_P001 | Maize | extracellular | 81.75 | 44.65 |
| KRH44408 | Soybean | golgi | 51.06 | 44.16 |
| EER93244 | Sorghum | extracellular, vacuole | 40.74 | 39.9 |
| EES01494 | Sorghum | plasma membrane | 41.01 | 38.94 |
| CDX80516 | Canola | plastid | 31.48 | 38.89 |
Protein Annotations
| EnsemblPlants:EES11054 | EnsemblPlantsGene:SORBI_3006G133100 | EntrezGene:8073718 | Gene3D:2.60.120.260 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf |
| InterPro:IPR008979 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF8 | PFAM:PF04862 | ProteinID:EES11054 | ProteinID:EES11054.1 |
| RefSeq:XP_002446726.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF49785 | TMHMM:TMhelix | UniParc:UPI0001A86D17 |
| UniProt:C5YBF5 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:49673685..49677776
Molecular Weight (calculated)
40364.1 Da
IEP (calculated)
5.050
GRAVY (calculated)
-0.024
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESGSSRRG VLLFLLVGVA AAGVASAIPD GLLPNGNFEQ GPDKSQMNGS RVIGQNSIPC WETSGFVEYI EPGQQQNDMV LVVPEGARAV RLGNDATIRQ
101: QLPGLTRSMS YSITFSAART CAQAEQLNVS VAAESGVLPV QTVYTSSGWD SYSYAFKARH TAVWLTIHNP GVEEDPACGP IIDSVAIKAL HPPSRVKDNM
201: LKNGDFEEGP YMFPDLAWGV LVPPMDEDDV SPLPGWMIMS DTKAVKYLDA AHFAVPHGAY AVELVAGTEA ALVQEVQTKP GRSYKLSFSV GDAANGCAST
301: LLVDAYAARG RQPVSYESHG MGGCVRSELE FAAVANLTRV VFQSMGHYMK PDGTLCGPVV DDVSLVSLPR HAARRLLM
101: QLPGLTRSMS YSITFSAART CAQAEQLNVS VAAESGVLPV QTVYTSSGWD SYSYAFKARH TAVWLTIHNP GVEEDPACGP IIDSVAIKAL HPPSRVKDNM
201: LKNGDFEEGP YMFPDLAWGV LVPPMDEDDV SPLPGWMIMS DTKAVKYLDA AHFAVPHGAY AVELVAGTEA ALVQEVQTKP GRSYKLSFSV GDAANGCAST
301: LLVDAYAARG RQPVSYESHG MGGCVRSELE FAAVANLTRV VFQSMGHYMK PDGTLCGPVV DDVSLVSLPR HAARRLLM
001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP
Arabidopsis Description
At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.