Factsheet for HORVU2Hr1G085440.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G349800.1	Wheat	mitochondrion	95.24	95.49
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	93.92	94.16
TraesCS2B01G369800.1	Wheat	extracellular	92.59	93.33
Os04t0494950-01	Rice	extracellular, vacuole	71.16	72.31
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	70.63	68.11
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	67.46	67.11
EES11054	Sorghum	extracellular, vacuole	65.34	65.34
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	61.11	64.35
GSMUA_Achr1P14570_001	Banana	extracellular	59.26	60.87
GSMUA_Achr2P08300_001	Banana	extracellular	58.2	59.62
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	59.26	59.26
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	52.91	59.0
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	52.91	58.82
HORVU5Hr1G094750.2	Barley	extracellular	60.05	58.81
PGSC0003DMT400074806	Potato	extracellular	56.35	57.41
Solyc08g067030.2.1	Tomato	extracellular	56.35	57.41
Solyc03g120040.2.1	Tomato	extracellular, nucleus	39.15	57.36
CDX91217	Canola	extracellular	55.03	56.83
PGSC0003DMT400014547	Potato	extracellular	55.29	56.79
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	55.03	56.52
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	54.5	56.28
Bra020500.1-P	Field mustard	extracellular	54.5	56.28
CDY05493	Canola	extracellular	54.5	56.28
CDX85713	Canola	extracellular	54.5	56.28
PGSC0003DMT400073388	Potato	mitochondrion	54.76	55.8
CDX97108	Canola	golgi	53.97	55.74
KRH05109	Soybean	nucleus	53.7	55.46
KRH16010	Soybean	nucleus	53.7	55.46
Solyc06g067910.2.1	Tomato	nucleus	54.5	55.38
HORVU6Hr1G037000.1	Barley	extracellular	54.76	55.35
Bra009841.1-P	Field mustard	extracellular	53.7	55.31
CDX80511	Canola	extracellular	53.7	55.31
CDX88180	Canola	extracellular	53.7	55.31
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.17	55.07
CDY19801	Canola	extracellular	53.7	54.86
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	53.44	54.74
Bra011349.1-P	Field mustard	golgi	52.65	54.52
CDX75247	Canola	golgi	52.65	54.52
CDX68849	Canola	golgi	52.65	54.52
KRH52489	Soybean	extracellular, golgi	52.91	54.05
PGSC0003DMT400073682	Potato	cytosol	47.88	54.03
KRH52488	Soybean	extracellular	51.59	53.42
KRH23537	Soybean	nucleus	52.38	52.94
KRH09784	Soybean	nucleus	52.38	52.94
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	56.61	52.84
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	52.65	52.37
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	51.85	51.58
KRH44408	Soybean	golgi	51.85	44.85
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	58.2	44.0
CDX80516	Canola	plastid	33.33	41.18
HORVU5Hr1G109880.2	Barley	golgi, vacuole	45.24	41.01
HORVU2Hr1G085520.2	Barley	extracellular	39.42	40.82
Zm00001d003185_P001	Maize	extracellular	67.46	36.85
HORVU3Hr1G072860.3	Barley	plastid	37.83	31.5

Protein Annotations

EnsemblPlants:HORVU2Hr1G085440.1	EnsemblPlantsGene:HORVU2Hr1G085440	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
TMHMM:TMhelix	UniParc:UPI000294E7EF	UniProt:M0Y5F5	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr2H:+:617732490..617735131

Molecular Weight (calculated)

40785.2 Da

IEP (calculated)

8.452

GRAVY (calculated)

0.007

Length

378 amino acids

Sequence
(BLAST)

001: MGMAEGMMRC RCMALLVLVG VAASAVSAVS DGLLPNGNFK DGPAKSELNG TVVMGRHSIP NWEISGFVEY IQSGHTQGGM MVAVPEGASA VRLGNDASIR
101: QNIRVTRRAY YSVTFSAART CAQAEKLNVS VAADSGVLPV QTVYNSGGWD SYSWAFRAMH SAVWLAIHNP GVEEDPACGP VIDAIAIKTL QPPTKTKGNM
201: LRNGDFEDGP YIFPDSPWGV LVPPMDEDSC SPLPGWMIMS STKVVKYVDA PRYRVPHGAR AVELVAGREA ALVQEVRTVA GRSYRLQFYV GDAANGCKES
301: MVVEAYVAAA SLKVQYQSQG KGGYRRAMLD FVAVGNLTRV VFQSLHYHMK VDGTLCGPVV DDISLVSVHK RAARRLFM

Best Arabidopsis Sequence Match ( AT5G25460.1 )
(BLAST)

001: MEGVTVVSFF LLFIATAMAA KSTVSFRDGM LPNGDFELGP KPSDMKGTEI LNKLAIPNWE VTGFVEYIKS GHKQGDMLLV VPAGKFAVRL GNEASIKQRL
101: KVVKGMYYSL TFSAARTCAQ DERLNISVAP DSGVIPIQTV YSSSGWDLYA WAFQAESDVA EVVIHNPGVE EDPACGPLID GVAMRSLYPP RPTNKNILKN
201: GGFEEGPLVL PGSTTGVLIP PFIEDDHSPL PGWMVESLKA VKYVDVEHFS VPQGRRAIEL VAGKESAIAQ VVRTVIGKTY VLSFAVGDAN NACKGSMVVE
301: AFAGKDTLKV PYESKGTGGF KRASIRFVAV STRSRIMFYS TFYAMRSDDF SSLCGPVIDD VKLISVRKP

Arabidopsis Description

At5g25460 [Source:UniProtKB/TrEMBL;Acc:Q94F20]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.