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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 1
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54909 Canola cytoskeleton, cytosol, peroxisome 67.65 61.06
CDX80511 Canola extracellular 70.26 58.58
CDX88180 Canola extracellular 70.26 58.58
CDY05493 Canola extracellular 68.63 57.38
CDY19801 Canola extracellular 68.95 57.03
AT5G25460.1 Thale cress endoplasmic reticulum, extracellular 66.99 55.56
CDX85713 Canola extracellular 64.71 54.1
CDX91217 Canola extracellular 64.71 54.1
CDX97108 Canola golgi 61.76 51.64
CDX79913 Canola cytosol 35.62 51.17
CDY48764 Canola cytosol 32.68 49.75
CDX75247 Canola golgi 58.82 49.32
CDX68849 Canola golgi 58.5 49.04
VIT_04s0008g05010.t01 Wine grape extracellular, golgi 57.19 47.55
KRH05109 Soybean nucleus 56.54 47.27
KRH16010 Soybean nucleus 56.54 47.27
KRH52488 Soybean extracellular 53.59 44.93
Solyc08g067030.2.1 Tomato extracellular 54.25 44.74
PGSC0003DMT400074806 Potato extracellular 53.92 44.47
GSMUA_Achr7P08400_001 Banana endoplasmic reticulum, extracellular, vacuole 52.29 43.6
TraesCS6D01G166800.1 Wheat extracellular, golgi, vacuole 48.37 43.53
GSMUA_Achr2P17020_001 Banana endoplasmic reticulum, vacuole 50.98 42.51
GSMUA_Achr1P14570_001 Banana extracellular 50.98 42.39
KRH52489 Soybean extracellular, golgi 50.65 41.89
GSMUA_Achr2P08300_001 Banana extracellular 50.0 41.46
HORVU6Hr1G037000.1 Barley extracellular 50.0 40.91
TraesCS6B01G207200.1 Wheat extracellular 50.0 40.91
TraesCS6A01G177500.1 Wheat extracellular 49.67 40.64
KXG29757 Sorghum golgi 48.69 40.05
TraesCS7B01G353600.2 Wheat extracellular 48.37 40.0
TraesCS7D01G442500.1 Wheat golgi 48.37 40.0
Os01t0611000-01 Rice extracellular 48.37 39.68
TraesCS7A01G453100.1 Wheat golgi 47.71 39.46
Os02t0205200-01 Rice mitochondrion, nucleus, plastid 47.06 39.45
OQU87155 Sorghum golgi 46.73 38.13
TraesCS5B01G390400.1 Wheat plastid 38.24 38.11
Zm00001d044455_P001 Maize plasma membrane 47.06 37.8
CDY54317 Canola endoplasmic reticulum 45.42 37.57
CDY57694 Canola extracellular 45.42 37.57
CDX87297 Canola endoplasmic reticulum, extracellular 41.18 36.84
CDY39990 Canola extracellular 40.85 36.66
CDY28002 Canola extracellular 43.14 36.16
CDY35979 Canola extracellular 42.81 35.89
Os04t0494950-01 Rice extracellular, vacuole 43.46 35.75
TraesCS2B01G455800.1 Wheat golgi 43.46 35.66
TraesCS2A01G434700.1 Wheat golgi 43.14 35.39
CDY22149 Canola extracellular 42.16 35.34
TraesCS2D01G432500.1 Wheat extracellular, golgi 42.81 35.12
TraesCS2B01G369800.1 Wheat extracellular 41.83 34.13
CDY14785 Canola extracellular, vacuole 41.18 34.05
Zm00001d003184_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, peroxisome 39.87 33.98
TraesCS2A01G351600.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 41.5 33.69
TraesCS2D01G349800.1 Wheat mitochondrion 41.5 33.69
HORVU2Hr1G085440.1 Barley extracellular 41.18 33.33
TraesCS5A01G385400.1 Wheat extracellular 40.85 33.16
CDY06908 Canola extracellular 40.52 33.16
Os04t0494600-01 Rice extracellular 40.52 32.89
TraesCS5D01G395400.1 Wheat extracellular 40.52 32.8
Os04t0495000-00 Rice extracellular, golgi, vacuole 39.87 32.71
TraesCS2B01G369500.1 Wheat cytosol 38.24 32.68
OQU81862 Sorghum cytosol, endoplasmic reticulum, golgi, mitochondrion 41.18 32.14
HORVU5Hr1G094750.2 Barley extracellular 40.52 32.12
TraesCS2A01G351400.1 Wheat extracellular 39.54 32.1
TraesCS2D01G349900.1 Wheat extracellular 38.24 32.05
TraesCS2B01G440300.1 Wheat extracellular 40.2 32.03
EES11053 Sorghum endoplasmic reticulum, extracellular, vacuole 39.22 31.83
TraesCS2A01G351700.1 Wheat extracellular 37.91 31.78
TraesCS2A01G421300.1 Wheat extracellular 39.87 31.69
Zm00001d003186_P001 Maize extracellular 39.22 31.66
TraesCS2B01G369900.1 Wheat extracellular 37.58 31.51
EES11054 Sorghum extracellular, vacuole 38.89 31.48
Zm00001d003183_P001 Maize extracellular, mitochondrion, plasma membrane, plastid 38.89 31.32
TraesCS2D01G349500.1 Wheat extracellular 38.56 31.3
TraesCS2B01G369700.1 Wheat endoplasmic reticulum, golgi 38.56 31.13
Os04t0494900-01 Rice extracellular 38.24 31.03
EES11052 Sorghum mitochondrion 37.91 30.61
TraesCS2D01G349700.1 Wheat endoplasmic reticulum, golgi, mitochondrion 37.91 30.61
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 37.25 30.16
TraesCS2A01G351500.1 Wheat extracellular, golgi 36.6 29.55
KXG26630 Sorghum extracellular 36.6 29.47
CDY48765 Canola extracellular 42.48 29.35
Zm00001d003187_P002 Maize endoplasmic reticulum, plasma membrane 37.25 28.72
Zm00001d025754_P001 Maize golgi 37.91 28.43
TraesCS2A01G351200.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.97 28.23
CDX79912 Canola extracellular, vacuole 41.18 28.0
TraesCS2B01G369300.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.64 27.97
TraesCS2D01G349200.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.64 27.97
KXG26629 Sorghum golgi 37.25 27.54
CDY17255 Canola plasma membrane 33.66 25.75
CDX99870 Canola plasma membrane 32.68 25.64
CDX84311 Canola plasma membrane 33.33 25.5
CDY26302 Canola extracellular, golgi, plasma membrane 33.99 25.43
Zm00001d015715_P001 Maize plasma membrane 48.37 25.26
HORVU2Hr1G085370.2 Barley endoplasmic reticulum 30.07 24.21
HORVU2Hr1G085340.2 Barley mitochondrion, plastid 39.54 24.2
Os03t0328501-00 Rice plastid 24.51 24.12
CDX78563 Canola extracellular, plasma membrane 26.8 21.3
CDX70545 Canola extracellular, vacuole 25.82 20.68
Zm00001d003185_P001 Maize extracellular 41.18 18.21
Os04t0494800-01 Rice extracellular 21.57 17.41
Os02t0527500-00 Rice plastid 7.19 16.79
Os07t0132600-00 Rice mitochondrion, nucleus, plastid 18.95 15.89
HORVU2Hr1G085520.2 Barley extracellular 16.34 13.7
Protein Annotations
EnsemblPlants:CDX80516EnsemblPlantsGene:GSBRNA2T00133620001Gene3D:2.60.120.260InterPro:DUF642InterPro:Galactose-bd-like_sfInterPro:IPR008979
PANTHER:PTHR31265PANTHER:PTHR31265:SF23PFAM:PF04862ProteinID:CDX80516ProteinID:CDX80516.1SEG:seg
UniParc:UPI0004EE96D1MapMan:35.2::::
Description
BnaC07g29280D
Coordinates
chrLK031821:+:1044629..1046253
Molecular Weight (calculated)
33805.2 Da
IEP (calculated)
9.948
GRAVY (calculated)
-0.446
Length
306 amino acids
Sequence
(BLAST)
001: MLSSVFKTRN DRVKQKGMKS ADFDVKKDSK GRHQPSCLPL SCFRKSSSRN RSDESSVRSR RKRYYSPSSD ESFEDSRSKE KESFSDSGAD VVQPWVGSIR
101: LGVSGEEEDS ACGPLIDGVA MRALYPPRPT NKNILKNGGF EEGPLVLPGS TTRVLIPPFI EDDHSPLPGW MVESLKAVKY VDTEHFSIPQ GRRAIELVVG
201: KESAIAQVAR TIIGKTYVLS FAVGDANNAC KGSMVVEAFA GRDTLKVPYE SRGTGGFKRA SIRFVAVSTR TKVMFYSTFY AMRSDDFSSL CGPVIDDVKL
301: LSVRKR
Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)
001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP
Arabidopsis Description
At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.