Factsheet for TraesCS2A01G421300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G440300.1	Wheat	extracellular	94.81	95.05
TraesCS5A01G385400.1	Wheat	extracellular	65.19	66.58
TraesCS2A01G351400.1	Wheat	extracellular	64.16	65.52
Os04t0494600-01	Rice	extracellular	58.7	59.95
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	58.7	59.63
TraesCS2A01G351500.1	Wheat	extracellular, golgi	56.36	57.26
GSMUA_Achr1P14570_001	Banana	extracellular	54.29	56.79
TraesCS7A01G453100.1	Wheat	golgi	54.29	56.49
GSMUA_Achr2P08300_001	Banana	extracellular	53.77	56.1
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	53.25	54.38
TraesCS2A01G434700.1	Wheat	golgi	52.47	54.16
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	47.79	54.12
TraesCS2A01G351700.1	Wheat	extracellular	50.65	53.42
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	47.01	53.39
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	50.65	53.28
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	54.81	53.15
Zm00001d025754_P001	Maize	golgi	56.1	52.94
CDX91217	Canola	extracellular	49.61	52.19
KXG26629	Sorghum	golgi	56.1	52.17
Bra009841.1-P	Field mustard	extracellular	49.35	51.77
CDX80511	Canola	extracellular	49.35	51.77
CDX88180	Canola	extracellular	49.35	51.77
CDX85713	Canola	extracellular	49.09	51.64
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	49.09	51.36
TraesCS6A01G177500.1	Wheat	extracellular	49.87	51.34
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	48.57	51.23
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	49.09	51.22
CDY05493	Canola	extracellular	48.57	51.09
Bra020500.1-P	Field mustard	extracellular	48.57	51.09
CDY19801	Canola	extracellular	49.09	51.08
Solyc08g067030.2.1	Tomato	extracellular	49.09	50.94
PGSC0003DMT400074806	Potato	extracellular	48.83	50.67
CDX97108	Canola	golgi	47.79	50.27
KRH05109	Soybean	nucleus	47.79	50.27
KRH16010	Soybean	nucleus	47.53	50.0
CDX68849	Canola	golgi	47.27	49.86
CDX75247	Canola	golgi	47.01	49.59
Bra011349.1-P	Field mustard	golgi	47.01	49.59
PGSC0003DMT400073682	Potato	cytosol	43.12	49.55
Solyc06g067910.2.1	Tomato	nucleus	47.79	49.46
PGSC0003DMT400014547	Potato	extracellular	47.27	49.46
PGSC0003DMT400073388	Potato	mitochondrion	47.53	49.33
Solyc03g120040.2.1	Tomato	extracellular, nucleus	32.99	49.22
KRH23537	Soybean	nucleus	47.01	48.4
KRH09784	Soybean	nucleus	47.01	48.4
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	47.27	47.89
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	49.09	46.67
KRH52488	Soybean	extracellular	43.64	46.03
KRH52489	Soybean	extracellular, golgi	43.12	44.86
KRH44408	Soybean	golgi	46.49	40.96
CDX80516	Canola	plastid	31.69	39.87
TraesCS5A01G458700.1	Wheat	extracellular, golgi	43.38	38.66
TraesCS3A01G294300.1	Wheat	extracellular, golgi, plasma membrane	39.22	38.23

Protein Annotations

EnsemblPlants:TraesCS2A01G421300.1	EnsemblPlantsGene:TraesCS2A01G421300	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	MapMan:35.2

Description

No Description!

Coordinates

chr2A:+:676981986..676985600

Molecular Weight (calculated)

39207.3 Da

IEP (calculated)

5.582

GRAVY (calculated)

0.052

Length

385 amino acids

Sequence
(BLAST)

001: MVVGGARCAA VLLLAFAAAR AAPDVDGPLL NGNFEYPPNR SQMNGTRVTG AHAIPYWKAA GPVEYVESGT DRPGDGMVLP VPEGAHAVRL GSGASVRQQL
101: SVTRGARYSV TFSAARTCGQ SERLRLSVVP DAAADAPGRE LPIQTVYSAS GWDSYAWAFH AERGVVTLVI HHSDDGGGAE DPACGPLVDA VAIKTLHPAA
201: EAAGGNLLRN GGFEEGPYVA PGSTCGVLVP PMGEGAVSPL PGWMVMSYSK AAKYVDAARH AVPGGSRAVE LVAGVEAALV QEVDTVPGSA CRMEFSVGDA
301: GDGCVACGPE LQPMRVVAAA TGAQGTAAVE YHSRGTGGRA RGALSFTAEG SRTRVVLYSS GYHTMSDGSG SLCGPVVDDV SLVCA

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.