Factsheet for TraesCS2A01G351500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	93.4	93.4
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	92.88	92.88
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	90.24	90.48
Os04t0494900-01	Rice	extracellular	70.98	71.35
Zm00001d003186_P001	Maize	extracellular	70.18	70.18
EES11052	Sorghum	mitochondrion	69.13	69.13
KXG26630	Sorghum	extracellular	68.87	68.68
TraesCS7A01G453100.1	Wheat	golgi	61.48	62.97
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	60.95	61.27
TraesCS2A01G434700.1	Wheat	golgi	59.37	60.32
TraesCS2A01G351400.1	Wheat	extracellular	59.1	59.42
TraesCS5A01G385400.1	Wheat	extracellular	58.58	58.89
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	58.84	58.84
GSMUA_Achr1P14570_001	Banana	extracellular	56.46	58.15
TraesCS2A01G351700.1	Wheat	extracellular	55.67	57.81
GSMUA_Achr2P08300_001	Banana	extracellular	55.67	57.18
TraesCS2A01G421300.1	Wheat	extracellular	57.26	56.36
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	48.81	54.41
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	52.51	54.08
TraesCS6A01G177500.1	Wheat	extracellular	53.03	53.74
Solyc03g120040.2.1	Tomato	extracellular, nucleus	36.41	53.49
Solyc06g067910.2.1	Tomato	nucleus	52.24	53.23
PGSC0003DMT400073388	Potato	mitochondrion	51.72	52.83
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	50.92	52.73
PGSC0003DMT400074806	Potato	extracellular	51.45	52.56
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	46.97	52.51
PGSC0003DMT400014547	Potato	extracellular	50.92	52.45
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	50.4	52.33
Solyc08g067030.2.1	Tomato	extracellular	51.19	52.29
KRH16010	Soybean	nucleus	50.13	51.91
KRH05109	Soybean	nucleus	50.13	51.91
CDX85713	Canola	extracellular	50.13	51.91
CDX68849	Canola	golgi	49.87	51.78
CDX91217	Canola	extracellular	49.87	51.64
Bra011349.1-P	Field mustard	golgi	49.6	51.51
CDX75247	Canola	golgi	49.6	51.51
CDX97108	Canola	golgi	49.6	51.37
KRH09784	Soybean	nucleus	50.4	51.07
KRH23537	Soybean	nucleus	50.13	50.8
CDX80511	Canola	extracellular	49.08	50.68
CDX88180	Canola	extracellular	49.08	50.68
Bra009841.1-P	Field mustard	extracellular	49.08	50.68
CDY19801	Canola	extracellular	49.34	50.54
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	49.08	50.41
Bra020500.1-P	Field mustard	extracellular	48.55	50.27
CDY05493	Canola	extracellular	48.55	50.27
KRH52489	Soybean	extracellular, golgi	49.08	50.27
PGSC0003DMT400073682	Potato	cytosol	44.33	50.15
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	49.34	49.21
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	52.51	49.14
KRH52488	Soybean	extracellular	47.23	49.04
KRH44408	Soybean	golgi	48.55	42.11
TraesCS3A01G294300.1	Wheat	extracellular, golgi, plasma membrane	41.69	40.0
Os03t0328501-00	Rice	plastid	31.4	38.26
CDX80516	Canola	plastid	29.55	36.6
TraesCS5A01G458700.1	Wheat	extracellular, golgi	41.42	36.34
Os04t0494800-01	Rice	extracellular	28.23	28.23
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	21.37	22.19

Protein Annotations

EnsemblPlants:TraesCS2A01G351500.1	EnsemblPlantsGene:TraesCS2A01G351500	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:591604695..591606061

Molecular Weight (calculated)

40456.8 Da

IEP (calculated)

4.412

GRAVY (calculated)

-0.004

Length

379 amino acids

Sequence
(BLAST)

001: MMVRAREMVQ GPRCVALLLL VCMAALVASD TTDGLLPNGN FEEAPDRSQM DGTRVTGRYA IPRWEACGCV EYICSGQKQG DMVLPVPEGA HAVRLGNDAS
101: VQQQLSVTPG THYAITFSAA RTCAQAEKLN VTVGAQSGEL PIQTVYTSSG WDSYSWAFEA KESVVTLTVH NPGYDEDAAC GPVVDSFAIR TLLPPQSNEY
201: NMLKNGDFEE GPYICPSTSC GVMVPPMDED SYSPLFPWVI LSSTKSVRYV DAAHYAVPQG ARAVQLVFGA ESALVQEVCT VPGVSYRMEF SIGDAADGCT
301: GSLAVEAYAA GGRVTVPYES QGTGGFTRGV LEFTATEDRT RVVFVSASYN MKSDGTVCGP VVDDASLVCA QSHARRLLL

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.