Factsheet for Solyc08g067030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 6
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

extracellular: 20496099
extracellular: 22364583
extracellular: 22892874
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 20496099 doi

D Dahal, A Pich, HP Braun, K Wydra

Institute for Plant Diseases and Plant Protection, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Str.2, 30419 Hannover, Germany. dahal@ipp.uni-hannover.de

msms PMID: 22892874 doi

EH Konozy, H Rogniaux, M Causse, M Faurobert

Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074806	Potato	extracellular	97.3	97.3
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	69.27	75.59
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	74.93	75.54
KRH16010	Soybean	nucleus	72.51	73.5
KRH05109	Soybean	nucleus	72.24	73.22
CDX85713	Canola	extracellular	72.24	73.22
GSMUA_Achr1P14570_001	Banana	extracellular	72.51	73.1
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	66.31	72.57
CDX91217	Canola	extracellular	71.43	72.4
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	71.16	72.13
GSMUA_Achr2P08300_001	Banana	extracellular	70.35	70.73
CDX97108	Canola	golgi	69.54	70.49
CDX80511	Canola	extracellular	69.27	70.03
Bra009841.1-P	Field mustard	extracellular	69.27	70.03
CDX88180	Canola	extracellular	69.27	70.03
CDX75247	Canola	golgi	68.19	69.32
Bra011349.1-P	Field mustard	golgi	68.19	69.32
CDY19801	Canola	extracellular	69.0	69.19
CDY05493	Canola	extracellular	68.19	69.13
Bra020500.1-P	Field mustard	extracellular	68.19	69.13
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	68.46	68.83
CDX68849	Canola	golgi	67.66	68.77
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	67.92	68.66
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	66.85	67.95
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	66.04	66.76
KRH52488	Soybean	extracellular	64.96	66.03
KRH52489	Soybean	extracellular, golgi	64.96	65.14
Os01t0611000-01	Rice	extracellular	64.42	64.08
TraesCS6B01G207200.1	Wheat	extracellular	64.15	63.64
HORVU6Hr1G037000.1	Barley	extracellular	63.88	63.37
TraesCS6A01G177500.1	Wheat	extracellular	63.61	63.1
TraesCS7A01G453100.1	Wheat	golgi	62.8	62.97
TraesCS7B01G353600.2	Wheat	extracellular	62.8	62.97
Solyc06g067910.2.1	Tomato	nucleus	63.07	62.9
KXG29757	Sorghum	golgi	63.07	62.9
Solyc03g120040.2.1	Tomato	extracellular, nucleus	43.67	62.79
TraesCS7D01G442500.1	Wheat	golgi	62.53	62.7
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	61.19	62.19
OQU87155	Sorghum	golgi	62.53	61.87
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	56.06	61.18
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	62.53	61.05
Zm00001d044455_P001	Maize	plasma membrane	62.53	60.89
Os04t0494600-01	Rice	extracellular	60.11	59.15
Os04t0494950-01	Rice	extracellular, vacuole	58.22	58.06
Os04t0494900-01	Rice	extracellular	58.76	57.82
Zm00001d003186_P001	Maize	extracellular	58.49	57.26
TraesCS2B01G369800.1	Wheat	extracellular	57.41	56.8
HORVU2Hr1G085440.1	Barley	extracellular	57.41	56.35
TraesCS2D01G432500.1	Wheat	extracellular, golgi	56.6	56.3
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	57.14	56.23
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	57.41	56.05
EES11052	Sorghum	mitochondrion	57.14	55.94
Os04t0495000-00	Rice	extracellular, golgi, vacuole	56.06	55.76
TraesCS2B01G455800.1	Wheat	golgi	56.06	55.76
TraesCS2D01G349800.1	Wheat	mitochondrion	56.6	55.7
TraesCS5B01G390400.1	Wheat	plastid	45.82	55.37
TraesCS2A01G434700.1	Wheat	golgi	55.53	55.23
TraesCS5D01G395400.1	Wheat	extracellular	55.8	54.76
KXG26630	Sorghum	extracellular	56.06	54.74
TraesCS2B01G369500.1	Wheat	cytosol	52.56	54.47
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	55.26	54.38
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	57.41	54.34
CDX80516	Canola	plastid	44.74	54.25
EES11054	Sorghum	extracellular, vacuole	54.99	53.97
TraesCS5A01G385400.1	Wheat	extracellular	54.72	53.85
Os02t0527500-00	Rice	plastid	18.87	53.44
Solyc01g087540.2.1	Tomato	extracellular	52.83	53.41
TraesCS2A01G351400.1	Wheat	extracellular	54.18	53.32
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	51.48	53.2
TraesCS2D01G349500.1	Wheat	extracellular	53.91	53.05
TraesCS2D01G349900.1	Wheat	extracellular	51.75	52.6
HORVU5Hr1G094750.2	Barley	extracellular	54.45	52.33
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	53.37	52.24
TraesCS2B01G369900.1	Wheat	extracellular	50.94	51.78
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	52.83	51.72
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	52.56	51.59
TraesCS2A01G351700.1	Wheat	extracellular	50.67	51.51
TraesCS2A01G351500.1	Wheat	extracellular, golgi	52.29	51.19
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.75	50.66
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.48	50.4
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.94	49.87
TraesCS2B01G440300.1	Wheat	extracellular	51.21	49.48
TraesCS2A01G421300.1	Wheat	extracellular	50.94	49.09
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	51.75	48.36
Solyc04g015620.2.1	Tomato	plastid	47.71	47.84
Solyc02g070540.2.1	Tomato	endoplasmic reticulum, vacuole	49.6	47.06
KXG26629	Sorghum	golgi	51.75	46.38
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	47.17	46.05
Solyc04g015610.2.1	Tomato	extracellular	45.01	45.26
Zm00001d025754_P001	Maize	golgi	48.79	44.36
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	53.91	40.0
Zm00001d015715_P001	Maize	plasma membrane	61.73	39.08
Os03t0328501-00	Rice	plastid	27.76	33.12
HORVU2Hr1G085520.2	Barley	extracellular	31.81	32.33
Zm00001d003185_P001	Maize	extracellular	55.8	29.91
Os04t0494800-01	Rice	extracellular	19.68	19.26
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	17.52	17.81

Protein Annotations

EnsemblPlants:Solyc08g067030.2.1	EnsemblPlantsGene:Solyc08g067030.2	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF3	PFAM:PF04862	SEG:seg	SignalP:SignalP-TM	SUPFAM:SSF49785
TMHMM:TMhelix	UniParc:UPI000276C095	UniProt:K4CLS9	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr8:+:55934943..55939764

Molecular Weight (calculated)

40759.1 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.007

Length

371 amino acids

Sequence
(BLAST)

001: MKSSIKVLLL LVLLCAISSI SIAVIDGLLK NGNFEMPPSK ADLNGTEVLK HNAIPEWSIS GFVEYIKAGQ KQGDMLLVVP EGYAAVRLGN EASIKQILNV
101: TKGMYYSLTF SAARTCAQEE RINVSVTPDF GVLPIQTLYS SSGWDSYAWA FQAEFPQVEI LLHNPGVEED PACGPLIDSI AIRTLYPPRA TNQNLLKNGD
201: FEEGPYVFPN TSWGVLVPPN IEDDHSPLPA WMVESLKAVK YLDSDHFSVP HGKRAIELVA GKESAIAQVA RTTIGKMYQL SFKVGDASNA CEGSMIVEAF
301: AGRDTLKVPY ESMGKGGYKR AILRFKATAS RTRIMFLSTY YHTRSDDFVS LCGPVVDDVT LLSVRTHRRV L

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.