Factsheet for TraesCS7D01G442500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G353600.2	Wheat	extracellular	98.38	98.38
TraesCS7A01G453100.1	Wheat	golgi	97.84	97.84
Os01t0611000-01	Rice	extracellular	85.41	84.72
OQU87155	Sorghum	golgi	85.41	84.27
Zm00001d044455_P001	Maize	plasma membrane	83.51	81.1
GSMUA_Achr1P14570_001	Banana	extracellular	68.38	68.75
GSMUA_Achr2P08300_001	Banana	extracellular	68.11	68.29
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	67.3	67.66
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	61.62	67.06
TraesCS2D01G349800.1	Wheat	mitochondrion	68.11	66.84
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	64.32	65.03
Bra011349.1-P	Field mustard	golgi	64.05	64.93
CDX75247	Canola	golgi	64.05	64.93
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	59.46	64.9
CDX68849	Canola	golgi	63.78	64.66
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	63.24	64.11
CDX97108	Canola	golgi	63.24	63.93
KRH05109	Soybean	nucleus	63.24	63.93
KRH16010	Soybean	nucleus	63.24	63.93
TraesCS2D01G432500.1	Wheat	extracellular, golgi	64.05	63.54
CDY19801	Canola	extracellular	63.51	63.51
CDX88180	Canola	extracellular	62.97	63.49
Bra009841.1-P	Field mustard	extracellular	62.97	63.49
CDX80511	Canola	extracellular	62.97	63.49
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	63.24	63.41
CDX85713	Canola	extracellular	62.7	63.39
CDX91217	Canola	extracellular	62.43	63.11
PGSC0003DMT400074806	Potato	extracellular	62.97	62.8
Solyc08g067030.2.1	Tomato	extracellular	62.7	62.53
CDY05493	Canola	extracellular	61.08	61.75
Bra020500.1-P	Field mustard	extracellular	61.08	61.75
Solyc03g120040.2.1	Tomato	extracellular, nucleus	42.97	61.63
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	62.43	60.95
TraesCS2D01G349900.1	Wheat	extracellular	60.0	60.82
PGSC0003DMT400014547	Potato	extracellular	60.27	60.6
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	54.86	59.71
Solyc06g067910.2.1	Tomato	nucleus	59.73	59.41
TraesCS5D01G395400.1	Wheat	extracellular	60.54	59.26
KRH52489	Soybean	extracellular, golgi	59.19	59.19
PGSC0003DMT400073388	Potato	mitochondrion	59.19	59.03
KRH23537	Soybean	nucleus	59.46	58.82
KRH09784	Soybean	nucleus	59.46	58.82
KRH52488	Soybean	extracellular	57.84	58.63
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	63.78	58.27
TraesCS2D01G349500.1	Wheat	extracellular	58.38	57.29
PGSC0003DMT400073682	Potato	cytosol	51.35	56.72
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	56.76	55.26
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.59	53.3
CDX80516	Canola	plastid	40.0	48.37
KRH44408	Soybean	golgi	56.76	48.05
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	48.38	45.09
TraesCS3D01G294100.1	Wheat	plasma membrane	44.59	41.88

Protein Annotations

EnsemblPlants:TraesCS7D01G442500.1	EnsemblPlantsGene:TraesCS7D01G442500	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF12	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:561952526..561954979

Molecular Weight (calculated)

39597.7 Da

IEP (calculated)

8.425

GRAVY (calculated)

0.041

Length

370 amino acids

Sequence
(BLAST)

001: MRCAVVLLLV FAAARAAAVV TDGLLPNGNF ESGPAKSELV NGTVVKGGKA IPKWETSGFV EYIESGHKQG DMLLVVPQGA YAVRLGNDAS ILQRIPVARG
101: SYYAITFSAA RTCAQAERLN VSVSPESGVL PMQTIYGSNG WDSYAWAFKA KLDVVELVIH NPGVEEDPAC GPLIDAVAIR TLYPPTLSKG NMLKNGGFEE
201: GPYFLPNASW GVLVPPNIED DHSPLPAWMI MSSKAVKYVD AAHFKVPEGA RAVELVGGKE SALVQEVRTV PGWAYRLSFA VGDSADGCKG SMVAEAYAAR
301: STLKVPYESN GAGGYKRAVL DFVAVRDRTR VVFQSAFYHM KADGTLCGPV IDDAKLVGLR KKPSARRLML

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.