CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 8
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044455_P001	Maize	plasma membrane	92.0	90.55
Os01t0611000-01	Rice	extracellular	89.07	89.54
TraesCS7A01G453100.1	Wheat	golgi	84.8	85.95
TraesCS7B01G353600.2	Wheat	extracellular	84.53	85.68
TraesCS7D01G442500.1	Wheat	golgi	84.27	85.41
GSMUA_Achr1P14570_001	Banana	extracellular	68.27	69.57
GSMUA_Achr2P08300_001	Banana	extracellular	68.27	69.38
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	66.4	67.66
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	59.73	65.88
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	66.67	63.78
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	57.6	63.72
KXG26630	Sorghum	extracellular	64.27	63.42
KRH05109	Soybean	nucleus	61.6	63.11
KRH16010	Soybean	nucleus	61.6	63.11
EES11052	Sorghum	mitochondrion	63.73	63.06
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	61.33	62.84
PGSC0003DMT400074806	Potato	extracellular	62.13	62.8
CDX75247	Canola	golgi	61.07	62.74
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	61.07	62.74
Bra011349.1-P	Field mustard	golgi	61.07	62.74
CDX85713	Canola	extracellular	61.07	62.57
Solyc08g067030.2.1	Tomato	extracellular	61.87	62.53
CDX68849	Canola	golgi	60.8	62.47
EES11054	Sorghum	extracellular, vacuole	62.93	62.43
CDX80511	Canola	extracellular	61.07	62.4
Bra009841.1-P	Field mustard	extracellular	61.07	62.4
CDX88180	Canola	extracellular	61.07	62.4
KXG29757	Sorghum	golgi	61.87	62.37
CDX91217	Canola	extracellular	60.8	62.3
CDY19801	Canola	extracellular	61.33	62.16
CDX97108	Canola	golgi	60.53	62.02
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	60.8	61.79
Solyc03g120040.2.1	Tomato	extracellular, nucleus	42.13	61.24
Bra020500.1-P	Field mustard	extracellular	59.73	61.2
CDY05493	Canola	extracellular	59.73	61.2
KRH52489	Soybean	extracellular, golgi	59.73	60.54
Solyc06g067910.2.1	Tomato	nucleus	60.0	60.48
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	60.8	60.48
PGSC0003DMT400014547	Potato	extracellular	58.93	60.05
PGSC0003DMT400073388	Potato	mitochondrion	59.2	59.84
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	64.0	59.26
KRH52488	Soybean	extracellular	57.6	59.18
KRH23537	Soybean	nucleus	58.67	58.82
KRH09784	Soybean	nucleus	58.67	58.82
PGSC0003DMT400073682	Potato	cytosol	50.13	56.12
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	55.47	54.74
KXG26629	Sorghum	golgi	55.47	50.24
KRH44408	Soybean	golgi	56.0	48.05
CDX80516	Canola	plastid	38.13	46.73
EER93244	Sorghum	extracellular, vacuole	47.2	45.85
EES01494	Sorghum	plasma membrane	44.8	42.21

Protein Annotations

EnsemblPlants:OQU87155	EnsemblPlantsGene:SORBI_3003G217632	EntrezGene:8054372	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF12	PFAM:PF04862	ProteinID:OQU87155	ProteinID:OQU87155.1
RefSeq:XP_002455939.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785	UniParc:UPI0001A84A76	UniProt:A0A1W0VYG9
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:55308084..55311807

Molecular Weight (calculated)

39804.8 Da

IEP (calculated)

8.439

GRAVY (calculated)

0.087

Length

375 amino acids

Sequence
(BLAST)

001: MRRVALLLLL VCALARAAAV VTDGLLPNGN FEDGPPKSAL VNGTVVSGAN AIPRWETSGF VEYIESGHKQ GDMLLVVPQG AHAVRLGNEA SIRQRLAVAR
101: GAYYAITFSA ARTCAQAEAL NVSVSPEWGV LPMQTIYGSN GWDSYAWAFK AKLSTVTLVI HNPGVEEDPA CGPLIDGVAI RALYPPTLAR GNMLKNGGFE
201: EGPYFLPNAS WGVLVPPNIE DDHSPLPGWM IASSKAVKYV DAAHFAVPQG ARAVELVGGR ESALVQEVRT VPGWSYRLAF AVGDSGDGCT GSMVAEAYAA
301: RATVKVPYES KGTGGYKRAV LDFTAVANRT RVVFQSTFYH MKADGTLCGP LVDDASVVGL RKKPAAAGRR LLQFL

Best Arabidopsis Sequence Match ( AT5G25460.1 )
(BLAST)

001: MEGVTVVSFF LLFIATAMAA KSTVSFRDGM LPNGDFELGP KPSDMKGTEI LNKLAIPNWE VTGFVEYIKS GHKQGDMLLV VPAGKFAVRL GNEASIKQRL
101: KVVKGMYYSL TFSAARTCAQ DERLNISVAP DSGVIPIQTV YSSSGWDLYA WAFQAESDVA EVVIHNPGVE EDPACGPLID GVAMRSLYPP RPTNKNILKN
201: GGFEEGPLVL PGSTTGVLIP PFIEDDHSPL PGWMVESLKA VKYVDVEHFS VPQGRRAIEL VAGKESAIAQ VVRTVIGKTY VLSFAVGDAN NACKGSMVVE
301: AFAGKDTLKV PYESKGTGGF KRASIRFVAV STRSRIMFYS TFYAMRSDDF SSLCGPVIDD VKLISVRKP

Arabidopsis Description

At5g25460 [Source:UniProtKB/TrEMBL;Acc:Q94F20]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.