Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 7
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16010 | Soybean | nucleus | 80.43 | 80.87 |
| Bra023324.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 74.18 | 80.29 |
| KRH05109 | Soybean | nucleus | 79.35 | 79.78 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 71.74 | 77.88 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 76.63 | 77.05 |
| Bra009841.1-P | Field mustard | extracellular | 76.63 | 76.84 |
| CDX80511 | Canola | extracellular | 76.63 | 76.84 |
| CDX88180 | Canola | extracellular | 76.63 | 76.84 |
| CDX85713 | Canola | extracellular | 76.36 | 76.78 |
| CDX91217 | Canola | extracellular | 76.36 | 76.78 |
| CDX97108 | Canola | golgi | 76.09 | 76.5 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 75.82 | 76.44 |
| KRH52488 | Soybean | extracellular | 75.54 | 76.16 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 75.82 | 75.61 |
| CDY05493 | Canola | extracellular | 74.73 | 75.14 |
| Bra020500.1-P | Field mustard | extracellular | 74.73 | 75.14 |
| CDY19801 | Canola | extracellular | 75.54 | 75.14 |
| CDX75247 | Canola | golgi | 74.46 | 75.07 |
| Bra011349.1-P | Field mustard | golgi | 74.46 | 75.07 |
| Solyc08g067030.2.1 | Tomato | extracellular | 75.54 | 74.93 |
| CDX68849 | Canola | golgi | 74.18 | 74.79 |
| PGSC0003DMT400074806 | Potato | extracellular | 75.27 | 74.66 |
| KRH52489 | Soybean | extracellular, golgi | 75.0 | 74.59 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 74.46 | 74.46 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 73.1 | 72.9 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 78.8 | 71.6 |
| GSMUA_Achr7P08400_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 71.2 | 71.39 |
| GSMUA_Achr2P17020_001 | Banana | endoplasmic reticulum, vacuole | 70.11 | 70.3 |
| KXG29757 | Sorghum | golgi | 68.75 | 68.01 |
| TraesCS7B01G353600.2 | Wheat | extracellular | 68.21 | 67.84 |
| Os01t0611000-01 | Rice | extracellular | 68.75 | 67.83 |
| TraesCS7A01G453100.1 | Wheat | golgi | 67.93 | 67.57 |
| HORVU6Hr1G037000.1 | Barley | extracellular | 68.48 | 67.38 |
| TraesCS7D01G442500.1 | Wheat | golgi | 67.66 | 67.3 |
| TraesCS6A01G177500.1 | Wheat | extracellular | 67.93 | 66.84 |
| TraesCS6B01G207200.1 | Wheat | extracellular | 67.93 | 66.84 |
| OQU87155 | Sorghum | golgi | 67.66 | 66.4 |
| TraesCS6D01G166800.1 | Wheat | extracellular, golgi, vacuole | 60.33 | 65.29 |
| Os02t0205200-01 | Rice | mitochondrion, nucleus, plastid | 64.67 | 65.21 |
| Zm00001d044455_P001 | Maize | plasma membrane | 67.12 | 64.83 |
| Os04t0494600-01 | Rice | extracellular | 58.97 | 57.56 |
| Zm00001d003186_P001 | Maize | extracellular | 59.24 | 57.52 |
| Os04t0494950-01 | Rice | extracellular, vacuole | 57.88 | 57.26 |
| Os02t0527500-00 | Rice | plastid | 20.38 | 57.25 |
| CDX80516 | Canola | plastid | 47.55 | 57.19 |
| EES11052 | Sorghum | mitochondrion | 58.15 | 56.46 |
| Os04t0494900-01 | Rice | extracellular | 57.61 | 56.23 |
| Zm00001d003183_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 57.61 | 55.79 |
| TraesCS2B01G455800.1 | Wheat | golgi | 56.52 | 55.76 |
| TraesCS2B01G369800.1 | Wheat | extracellular | 56.79 | 55.73 |
| EES11054 | Sorghum | extracellular, vacuole | 57.07 | 55.56 |
| TraesCS2D01G432500.1 | Wheat | extracellular, golgi | 56.25 | 55.5 |
| TraesCS2D01G349800.1 | Wheat | mitochondrion | 56.79 | 55.44 |
| TraesCS2A01G434700.1 | Wheat | golgi | 55.98 | 55.23 |
| TraesCS2A01G351600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 56.52 | 55.17 |
| HORVU2Hr1G085440.1 | Barley | extracellular | 56.52 | 55.03 |
| OQU81862 | Sorghum | cytosol, endoplasmic reticulum, golgi, mitochondrion | 58.15 | 54.59 |
| KXG26630 | Sorghum | extracellular | 56.25 | 54.47 |
| TraesCS5D01G395400.1 | Wheat | extracellular | 55.71 | 54.23 |
| VIT_13s0064g00460.t01 | Wine grape | extracellular | 52.99 | 54.17 |
| TraesCS2B01G369700.1 | Wheat | endoplasmic reticulum, golgi | 55.71 | 54.09 |
| TraesCS5B01G390400.1 | Wheat | plastid | 45.11 | 54.07 |
| TraesCS2B01G369900.1 | Wheat | extracellular | 53.53 | 53.97 |
| EES11053 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 55.16 | 53.85 |
| Os04t0495000-00 | Rice | extracellular, golgi, vacuole | 54.35 | 53.62 |
| TraesCS5A01G385400.1 | Wheat | extracellular | 54.89 | 53.58 |
| TraesCS2D01G349700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 55.16 | 53.56 |
| Zm00001d003184_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 52.17 | 53.48 |
| TraesCS2A01G351700.1 | Wheat | extracellular | 52.99 | 53.42 |
| TraesCS2D01G349900.1 | Wheat | extracellular | 52.72 | 53.15 |
| HORVU2Hr1G085430.1 | Barley | endoplasmic reticulum, golgi | 54.08 | 52.65 |
| TraesCS2A01G351400.1 | Wheat | extracellular | 53.8 | 52.52 |
| TraesCS2B01G369500.1 | Wheat | cytosol | 51.09 | 52.51 |
| TraesCS2A01G351500.1 | Wheat | extracellular, golgi | 54.08 | 52.51 |
| HORVU5Hr1G094750.2 | Barley | extracellular | 54.62 | 52.07 |
| TraesCS2D01G349500.1 | Wheat | extracellular | 53.26 | 51.99 |
| VIT_08s0007g08460.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 50.82 | 50.95 |
| TraesCS2B01G440300.1 | Wheat | extracellular | 51.63 | 49.48 |
| TraesCS2A01G421300.1 | Wheat | extracellular | 51.36 | 49.09 |
| TraesCS2D01G349200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 50.0 | 48.55 |
| TraesCS2B01G369300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 50.0 | 48.55 |
| TraesCS2A01G351200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.73 | 48.28 |
| Zm00001d003187_P002 | Maize | endoplasmic reticulum, plasma membrane | 51.09 | 47.36 |
| KXG26629 | Sorghum | golgi | 52.17 | 46.38 |
| Zm00001d025754_P001 | Maize | golgi | 50.82 | 45.83 |
| HORVU2Hr1G085370.2 | Barley | endoplasmic reticulum | 46.2 | 44.74 |
| VIT_10s0003g03250.t01 | Wine grape | extracellular, golgi, plasma membrane | 47.01 | 44.13 |
| Zm00001d015715_P001 | Maize | plasma membrane | 66.3 | 41.64 |
| HORVU2Hr1G085340.2 | Barley | mitochondrion, plastid | 54.35 | 40.0 |
| Os03t0328501-00 | Rice | plastid | 28.26 | 33.44 |
| HORVU2Hr1G085520.2 | Barley | extracellular | 32.88 | 33.15 |
| Zm00001d003185_P001 | Maize | extracellular | 57.07 | 30.35 |
| VIT_14s0068g02080.t01 | Wine grape | extracellular, plasma membrane, vacuole | 29.89 | 27.71 |
| Os04t0494800-01 | Rice | extracellular | 20.11 | 19.53 |
| Os07t0132600-00 | Rice | mitochondrion, nucleus, plastid | 18.21 | 18.36 |
Protein Annotations
| EntrezGene:100252479 | wikigene:100252479 | Gene3D:2.60.120.260 | MapMan:35.2 | ProteinID:CCB46774 | ProteinID:CCB46774.1 |
| InterPro:DUF642 | UniProt:F6H3T7 | EMBL:FN595231 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 | EntrezGene:LOC100252479 |
| wikigene:LOC100252479 | PFAM:PF04862 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF3 | SUPFAM:SSF49785 | SignalP:SignalP-noTM |
| UniParc:UPI00015C9152 | ArrayExpress:VIT_04s0008g05010 | EnsemblPlantsGene:VIT_04s0008g05010 | EnsemblPlants:VIT_04s0008g05010.t01 | unigene:Vvi.6780 | RefSeq:XP_002284962 |
| RefSeq:XP_002284962.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:4513055..4516401
Molecular Weight (calculated)
40336.4 Da
IEP (calculated)
5.990
GRAVY (calculated)
-0.048
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAVAFLLLL LCATCHIALS FTDGLLPNGN FELGPKPSDM KGTEVIGPHA IPEWETSGFI EYIKAGQKQG DMLLVVPEGA FAVRLGNEAS IKQRVKVIKG
101: MYYSITFSAA RTCAQEERLN ISVAPDWGVL PMQTLYSSNG WDSYAWAFQA DYDVIEIVIH NPGVEEDPAC GPLIDSVAFR ALYPPRPSSK NLLKNGGFEE
201: GPYVFPNTSW GVLIPPNIED DHSPLPGWMV ESLKAVKYID SDHFSVPQEK RAVELVAGKE SAIAQVARTI PGKTYALSFS VGDASNSCEG SMVVEAFAGR
301: DTIKVPYESK GKGGFKRAVL RFVAVSNRTR IMFLSTFYTM RSDDYASLCG PVLDDVKLLS LRTPPRHI
101: MYYSITFSAA RTCAQEERLN ISVAPDWGVL PMQTLYSSNG WDSYAWAFQA DYDVIEIVIH NPGVEEDPAC GPLIDSVAFR ALYPPRPSSK NLLKNGGFEE
201: GPYVFPNTSW GVLIPPNIED DHSPLPGWMV ESLKAVKYID SDHFSVPQEK RAVELVAGKE SAIAQVARTI PGKTYALSFS VGDASNSCEG SMVVEAFAGR
301: DTIKVPYESK GKGGFKRAVL RFVAVSNRTR IMFLSTFYTM RSDDYASLCG PVLDDVKLLS LRTPPRHI
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Arabidopsis Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.