Factsheet for HORVU2Hr1G085340.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G351400.1	Wheat	extracellular	68.0	90.19
TraesCS2B01G369500.1	Wheat	cytosol	64.2	89.66
TraesCS2D01G349500.1	Wheat	extracellular	67.6	89.66
HORVU5Hr1G094750.2	Barley	extracellular	61.8	80.05
Os04t0494600-01	Rice	extracellular	49.8	66.05
GSMUA_Achr1P14570_001	Banana	extracellular	43.8	59.51
HORVU2Hr1G085440.1	Barley	extracellular	44.0	58.2
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	44.2	58.16
GSMUA_Achr2P08300_001	Banana	extracellular	42.8	57.99
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	43.6	57.67
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	45.6	57.43
KXG26629	Sorghum	golgi	46.6	56.28
Zm00001d025754_P001	Maize	golgi	44.6	54.66
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	37.0	54.41
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	40.0	54.35
Solyc08g067030.2.1	Tomato	extracellular	40.0	53.91
PGSC0003DMT400074806	Potato	extracellular	39.8	53.64
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	36.2	53.39
KRH05109	Soybean	nucleus	39.0	53.28
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	38.8	53.15
KRH16010	Soybean	nucleus	38.8	53.01
CDY19801	Canola	extracellular	39.2	52.97
CDX88180	Canola	extracellular	38.8	52.86
CDX80511	Canola	extracellular	38.8	52.86
Bra009841.1-P	Field mustard	extracellular	38.8	52.86
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	38.6	52.73
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	38.8	52.57
CDX91217	Canola	extracellular	38.2	52.19
CDX68849	Canola	golgi	38.0	52.05
HORVU6Hr1G037000.1	Barley	extracellular	38.8	51.87
Bra011349.1-P	Field mustard	golgi	37.8	51.78
CDX75247	Canola	golgi	37.8	51.78
Bra020500.1-P	Field mustard	extracellular	37.8	51.64
CDX85713	Canola	extracellular	37.8	51.64
CDY05493	Canola	extracellular	37.8	51.64
Solyc06g067910.2.1	Tomato	nucleus	38.2	51.34
PGSC0003DMT400073388	Potato	mitochondrion	38.0	51.21
Solyc03g120040.2.1	Tomato	extracellular, nucleus	26.4	51.16
PGSC0003DMT400014547	Potato	extracellular	37.6	51.09
KRH23537	Soybean	nucleus	38.2	51.07
KRH09784	Soybean	nucleus	38.2	51.07
CDX97108	Canola	golgi	37.2	50.82
KRH52489	Soybean	extracellular, golgi	37.4	50.54
PGSC0003DMT400073682	Potato	cytosol	33.2	49.55
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	39.8	49.14
KRH52488	Soybean	extracellular	35.8	49.04
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	37.0	48.68
KRH44408	Soybean	golgi	36.6	41.88
HORVU5Hr1G109880.2	Barley	golgi, vacuole	34.2	41.01
CDX80516	Canola	plastid	24.2	39.54
HORVU2Hr1G085520.2	Barley	extracellular	24.8	33.97
HORVU3Hr1G072860.3	Barley	plastid	28.2	31.06

Protein Annotations

EnsemblPlants:HORVU2Hr1G085340.2	EnsemblPlantsGene:HORVU2Hr1G085340	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	SEG:seg	UniParc:UPI000B468E3A	UniProt:A0A287IRB4
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:617264988..617267555

Molecular Weight (calculated)

53959.8 Da

IEP (calculated)

9.807

GRAVY (calculated)

-0.339

Length

500 amino acids

Sequence
(BLAST)

001: SFPGRRKASV RACAVRRPTK GISGTFRSDA HTQRLRQPSI SQKPLRPRGR TQEGMLLRSW FAAFIFREAR ADDAHPARAP ARSAAPNWPH ASTVGRAISG
101: ARRRLPGYAT PWSSPSSHEE EEMMLNGALL LLVCAAARAA ASGGDGPLLN GNFEHAPNRS QMNGTRVKGK HAIPYWKATG FVEYIESGTK QDDMVLTVPE
201: GRHAVRLGTE SSVEQQLSVT RGRYYSITFS AARTCAQSEK LRVSIVPGDA SAGELPVQTV YTSSGWDSYA WAFRAKQGVV SLIIHHGDDQ VDDPACGPIV
301: DAVAIRTLNP PHPTHQNMLI NGDFEEGPYV TPGSRWGVLV PPMDEDATSP LPGWAVMSYS KVVKYIDAAH FRVPHGSRAV ELVAGVEVAL VQEVAVVPGR
401: SYRLRFSVGD AGNGCAASPM SVQVATSYGG KRVSYDSRGT GGHVRDALEF KAEGNSTRVV FYSTGYHTTS DSSGTLCGPV VDDVSLVGVP HPHARRRLLR

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.