CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75247	Canola	golgi	98.63	98.63
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	92.6	92.6
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	73.97	79.65
CDX85713	Canola	extracellular	78.63	78.42
CDX91217	Canola	extracellular	78.63	78.42
CDX80511	Canola	extracellular	76.99	76.57
CDX88180	Canola	extracellular	76.99	76.57
CDX97108	Canola	golgi	76.71	76.5
CDY05493	Canola	extracellular	76.71	76.5
CDY19801	Canola	extracellular	76.99	75.95
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	74.79	74.18
KRH16010	Soybean	nucleus	72.88	72.68
KRH05109	Soybean	nucleus	72.33	72.13
KRH52488	Soybean	extracellular	67.95	67.95
GSMUA_Achr1P14570_001	Banana	extracellular	68.22	67.66
Solyc08g067030.2.1	Tomato	extracellular	68.77	67.66
GSMUA_Achr2P08300_001	Banana	extracellular	68.22	67.48
PGSC0003DMT400074806	Potato	extracellular	68.49	67.39
KRH52489	Soybean	extracellular, golgi	67.4	66.49
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	66.85	66.48
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	66.3	65.94
TraesCS6B01G207200.1	Wheat	extracellular	65.48	63.9
TraesCS7A01G453100.1	Wheat	golgi	64.66	63.78
TraesCS7B01G353600.2	Wheat	extracellular	64.66	63.78
TraesCS7D01G442500.1	Wheat	golgi	64.66	63.78
HORVU6Hr1G037000.1	Barley	extracellular	65.21	63.64
TraesCS6A01G177500.1	Wheat	extracellular	64.93	63.37
KXG29757	Sorghum	golgi	64.11	62.9
Os01t0611000-01	Rice	extracellular	63.84	62.47
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	61.92	61.92
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	57.53	61.76
CDX87297	Canola	endoplasmic reticulum, extracellular	56.99	60.82
OQU87155	Sorghum	golgi	62.47	60.8
CDY39990	Canola	extracellular	56.71	60.7
CDY54317	Canola	endoplasmic reticulum	61.1	60.27
CDY57694	Canola	extracellular	61.1	60.27
Zm00001d044455_P001	Maize	plasma membrane	61.37	58.79
CDX80516	Canola	plastid	49.04	58.5
CDX79913	Canola	cytosol	32.88	56.34
Os04t0494600-01	Rice	extracellular	56.99	55.17
CDY22149	Canola	extracellular	55.07	55.07
CDY28002	Canola	extracellular	54.79	54.79
CDY35979	Canola	extracellular	54.79	54.79
Os04t0494950-01	Rice	extracellular, vacuole	55.62	54.57
TraesCS2D01G432500.1	Wheat	extracellular, golgi	55.62	54.42
CDY48764	Canola	cytosol	29.86	54.23
TraesCS2B01G455800.1	Wheat	golgi	55.34	54.16
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	56.16	53.95
TraesCS2D01G349900.1	Wheat	extracellular	53.7	53.7
TraesCS2A01G434700.1	Wheat	golgi	54.79	53.62
TraesCS2B01G369800.1	Wheat	extracellular	55.07	53.6
Zm00001d003186_P001	Maize	extracellular	55.62	53.56
TraesCS2B01G369900.1	Wheat	extracellular	53.42	53.42
Os04t0495000-00	Rice	extracellular, golgi, vacuole	54.25	53.08
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	54.79	53.05
TraesCS2A01G351700.1	Wheat	extracellular	52.88	52.88
EES11052	Sorghum	mitochondrion	54.79	52.77
TraesCS5B01G390400.1	Wheat	plastid	44.38	52.77
Os02t0527500-00	Rice	plastid	18.9	52.67
HORVU2Hr1G085440.1	Barley	extracellular	54.52	52.65
TraesCS5D01G395400.1	Wheat	extracellular	54.52	52.65
TraesCS2D01G349800.1	Wheat	mitochondrion	54.25	52.52
TraesCS2B01G369500.1	Wheat	cytosol	51.23	52.23
EES11054	Sorghum	extracellular, vacuole	53.97	52.12
Os04t0494900-01	Rice	extracellular	53.7	51.99
TraesCS5A01G385400.1	Wheat	extracellular	53.7	51.99
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	50.96	51.81
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	55.62	51.79
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	53.42	51.72
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	53.15	51.19
KXG26630	Sorghum	extracellular	53.15	51.05
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	52.88	50.92
CDY14785	Canola	extracellular, vacuole	51.23	50.54
HORVU5Hr1G094750.2	Barley	extracellular	53.42	50.52
TraesCS2A01G351400.1	Wheat	extracellular	52.05	50.4
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	51.78	50.0
TraesCS2A01G351500.1	Wheat	extracellular, golgi	51.78	49.87
TraesCS2D01G349500.1	Wheat	extracellular	51.51	49.87
CDY06908	Canola	extracellular	50.96	49.73
TraesCS2B01G440300.1	Wheat	extracellular	50.14	47.66
TraesCS2A01G421300.1	Wheat	extracellular	49.86	47.27
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.12	45.38
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.12	45.38
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.12	45.38
CDX84311	Canola	plasma membrane	49.04	44.75
CDY17255	Canola	plasma membrane	49.04	44.75
KXG26629	Sorghum	golgi	50.14	44.2
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	47.67	43.83
Zm00001d025754_P001	Maize	golgi	48.77	43.63
CDY26302	Canola	extracellular, golgi, plasma membrane	48.49	43.28
CDY48765	Canola	extracellular	51.78	42.66
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	43.29	41.58
CDX79912	Canola	extracellular, vacuole	50.96	41.33
CDX99870	Canola	plasma membrane	43.84	41.03
Zm00001d015715_P001	Maize	plasma membrane	62.19	38.74
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	52.05	38.0
HORVU2Hr1G085520.2	Barley	extracellular	33.97	33.97
Os03t0328501-00	Rice	plastid	26.3	30.87
Zm00001d003185_P001	Maize	extracellular	56.16	29.62
CDX78563	Canola	extracellular, plasma membrane	30.96	29.35
CDX70545	Canola	extracellular, vacuole	29.86	28.53
Os04t0494800-01	Rice	extracellular	18.9	18.21
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	17.53	17.53

Protein Annotations

EnsemblPlants:CDX68849	EnsemblPlantsGene:GSBRNA2T00130573001	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF23	PFAM:PF04862	ProteinID:CDX68849	ProteinID:CDX68849.1	SignalP:SignalP-noTM
SUPFAM:SSF49785	TMHMM:TMhelix	UniParc:UPI0004EE5A72	MapMan:35.2	:	:

Description

BnaC01g06040D

Coordinates

chrLK031789:-:1558172..1560784

Molecular Weight (calculated)

39781.0 Da

IEP (calculated)

8.654

GRAVY (calculated)

-0.051

Length

365 amino acids

Sequence
(BLAST)

001: MKKMGVIVFL LLHSIFYTAF CFKDGLLPNG DFELGPHHTD MKGTQVMNKT AIPSWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHGV MPIQTVYSSS GWDLYSWAFK AQGDYAEVVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNTS SGVLIPPNAV DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELIAGK ESAVAQVVRT TPGKIYVLSF AVGDASNACA GSMIVEAFAG
301: KDTLKVPYES KGKGGFKRAS LKFVAVSDRT RIMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRM

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.