CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	99.45	99.45
AT3G08030.1	Thale cress	extracellular	91.23	91.23
CDY28002	Canola	extracellular	90.68	90.68
CDY35979	Canola	extracellular	90.14	90.14
VIT_13s0064g00460.t01	Wine grape	extracellular	70.14	71.11
PGSC0003DMT400017671	Potato	extracellular	69.59	69.21
Solyc01g087540.2.1	Tomato	extracellular	69.04	68.66
KRH32968	Soybean	endoplasmic reticulum	66.58	66.21
KRH13974	Soybean	nucleus	66.3	65.94
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	64.93	65.29
KRH23881	Soybean	extracellular	60.27	62.32
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	64.66	60.51
CDX79913	Canola	cytosol	33.7	57.75
CDY48764	Canola	cytosol	31.23	56.72
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	52.6	56.64
EER93244	Sorghum	extracellular, vacuole	58.9	55.7
CDX75247	Canola	golgi	55.62	55.62
CDX68849	Canola	golgi	55.07	55.07
CDX85713	Canola	extracellular	55.07	54.92
CDY14785	Canola	extracellular, vacuole	55.62	54.86
CDX88180	Canola	extracellular	55.07	54.77
CDX80511	Canola	extracellular	55.07	54.77
CDX91217	Canola	extracellular	54.79	54.64
CDY06908	Canola	extracellular	55.89	54.55
Os03t0807700-01	Rice	plastid	58.08	53.94
CDY05493	Canola	extracellular	53.97	53.83
CDY19801	Canola	extracellular	54.52	53.78
CDX97108	Canola	golgi	53.42	53.28
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	57.81	53.15
Zm00001d034547_P002	Maize	extracellular, vacuole	58.9	51.93
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	44.66	51.58
HORVU5Hr1G109880.2	Barley	golgi, vacuole	57.53	50.36
CDY39990	Canola	extracellular	46.85	50.15
CDY57694	Canola	extracellular	50.68	50.0
CDX87297	Canola	endoplasmic reticulum, extracellular	46.85	50.0
CDY54317	Canola	endoplasmic reticulum	50.41	49.73
TraesCS5A01G458700.1	Wheat	extracellular, golgi	57.81	48.84
CDY48765	Canola	extracellular	56.99	46.95
CDX79912	Canola	extracellular, vacuole	57.53	46.67
CDX80516	Canola	plastid	35.34	42.16
Os07t0206900-01	Rice	cytosol, peroxisome	10.68	39.8
CDY17255	Canola	plasma membrane	41.92	38.25
CDX84311	Canola	plasma membrane	41.92	38.25
CDY26302	Canola	extracellular, golgi, plasma membrane	42.74	38.14
CDX99870	Canola	plasma membrane	38.9	36.41
CDX78563	Canola	extracellular, plasma membrane	29.86	28.31
CDX70545	Canola	extracellular, vacuole	29.59	28.27

Protein Annotations

EnsemblPlants:CDY22149	EnsemblPlantsGene:GSBRNA2T00018546001	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF2	PFAM:PF04862	ProteinID:CDY22149	ProteinID:CDY22149.1	SEG:seg
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEC123	UniProt:A0A078G9W8	MapMan:35.2	:

Description

BnaC01g39520DBnaC01g39520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9W8]

Coordinates

chrLK032128:+:205169..206915

Molecular Weight (calculated)

39023.0 Da

IEP (calculated)

7.592

GRAVY (calculated)

-0.001

Length

365 amino acids

Sequence
(BLAST)

001: MAVPKAIVLP LLLVLCGAAL GASAYEGYLR NGNFEESPKK TDMKKTVLIG KTALPEWETT GFVEYMSGGP QPGGMFFPVA HGVHAVRLGN EATISQKLKV
101: KPGSLYSLTF GASRTCAQEE VLRVSVPPQT GDLPLQTLYN SFGGDVYAWA FVPKTSEVTV TFHNPGVQED PACGPLLDAV AIKELVQPTY TEGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDVTSPLPG WIIESLKAVK FIDSKNFNVP FGQAAIELVA GKESAIAQVI RTSPGQTYSL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVTH TSVGGGHVKT ASLKFKALEA RTRITFFSGF YHTKKNDIGS LCGPVIDQIV VSHVA

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.