CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	95.18	86.15
KRH32968	Soybean	endoplasmic reticulum	79.04	76.02
KRH13974	Soybean	nucleus	77.62	74.66
PGSC0003DMT400017671	Potato	extracellular	69.69	67.03
VIT_13s0064g00460.t01	Wine grape	extracellular	67.71	66.39
Solyc01g087540.2.1	Tomato	extracellular	68.84	66.21
Bra029693.1-P	Field mustard	extracellular	62.89	60.82
CDY35979	Canola	extracellular	62.89	60.82
CDY28002	Canola	extracellular	62.89	60.82
AT3G08030.1	Thale cress	extracellular	62.61	60.55
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	62.61	60.55
CDY22149	Canola	extracellular	62.32	60.27
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	58.64	57.02
EER93244	Sorghum	extracellular, vacuole	58.92	53.89
Os03t0807700-01	Rice	plastid	57.79	51.91
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	57.79	51.39
Zm00001d034547_P002	Maize	extracellular, vacuole	60.06	51.21
HORVU5Hr1G109880.2	Barley	golgi, vacuole	57.79	48.92
KRH16010	Soybean	nucleus	49.29	47.54
KRH05109	Soybean	nucleus	49.01	47.27
TraesCS5A01G458700.1	Wheat	extracellular, golgi	57.79	47.22
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	42.21	47.15
KRH52488	Soybean	extracellular	46.18	44.66
KRH52489	Soybean	extracellular, golgi	45.33	43.24
KRH09784	Soybean	nucleus	45.61	43.05
KRH23537	Soybean	nucleus	45.04	42.51
Os07t0206900-01	Rice	cytosol, peroxisome	11.61	41.84
KRH44408	Soybean	golgi	46.74	37.76
KRH11195	Soybean	endoplasmic reticulum	35.98	32.32
KRH21062	Soybean	endoplasmic reticulum	35.41	31.81

Protein Annotations

EMBL:ACUP02007161	EnsemblPlants:KRH23881	EnsemblPlantsGene:GLYMA_12G008600	InterPro:DUF642	PANTHER:PTHR31265	PANTHER:PTHR31265:SF2
PFAM:PF04862	ProteinID:KRH23881	ProteinID:KRH23881.1	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296B133
UniProt:I1LNW8	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:633469..635129

Molecular Weight (calculated)

38809.1 Da

IEP (calculated)

9.084

GRAVY (calculated)

-0.042

Length

353 amino acids

Sequence
(BLAST)

001: MSETFIFTLS LVMLCAASAF AAVPHRLPEV YLKNGNFEEK PNPKYLKKTR LIGKYALPKW EISGHVEYIS GGPQPGGMYF PVSHGVHAVK PGKWYALILG
101: ASRTCAQDEL LRISVPPQSG DVPLRTLYSL NGDVIAWGFR PTSSVAKVIL HNPGIQEDPA CGPLLDAVAI AEFCSPKPAR ANFVKNPGFE EGPFPIFNST
201: NGVLLPPEQE DHVSPLPGWM IESLKAVKFI DAKHFDVPFG QGAVELIGGR ESVIAQILRT VPNKVYNMKL TIGDARNGCH GSMMVEAFVA KDTLKVPFKS
301: EGKGKFKTVS FKFRAIENRT RITFYSSFYH TRIHDYGSLC GPVIDQVIVY PVA

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.