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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023324.1-P Field mustard cytoskeleton, cytosol, peroxisome 92.08 99.12
CDX85713 Canola extracellular 98.36 98.36
AT5G11420.1 Thale cress extracellular, golgi, vacuole 92.62 92.62
CDX97108 Canola golgi 90.16 90.16
CDY54909 Canola cytoskeleton, cytosol, peroxisome 83.33 89.97
CDX80511 Canola extracellular 88.52 88.28
CDX88180 Canola extracellular 88.52 88.28
CDY05493 Canola extracellular 87.43 87.43
CDY19801 Canola extracellular 86.89 85.95
CDX75247 Canola golgi 79.23 79.45
CDX68849 Canola golgi 78.42 78.63
VIT_04s0008g05010.t01 Wine grape extracellular, golgi 76.78 76.36
KRH16010 Soybean nucleus 74.86 74.86
KRH05109 Soybean nucleus 74.59 74.59
PGSC0003DMT400074806 Potato extracellular 72.95 71.97
Solyc08g067030.2.1 Tomato extracellular 72.4 71.43
GSMUA_Achr1P14570_001 Banana extracellular 69.4 69.02
GSMUA_Achr2P17020_001 Banana endoplasmic reticulum, vacuole 69.13 68.94
GSMUA_Achr7P08400_001 Banana endoplasmic reticulum, extracellular, vacuole 68.85 68.66
KRH52488 Soybean extracellular 68.31 68.49
GSMUA_Achr2P08300_001 Banana extracellular 68.31 67.75
KRH52489 Soybean extracellular, golgi 67.49 66.76
CDX80516 Canola plastid 54.1 64.71
Os01t0611000-01 Rice extracellular 64.48 63.27
CDY54317 Canola endoplasmic reticulum 63.11 62.43
CDY57694 Canola extracellular 63.11 62.43
TraesCS7A01G453100.1 Wheat golgi 63.11 62.43
TraesCS7B01G353600.2 Wheat extracellular 63.11 62.43
TraesCS7D01G442500.1 Wheat golgi 63.11 62.43
CDX87297 Canola endoplasmic reticulum, extracellular 58.2 62.28
CDY39990 Canola extracellular 57.65 61.88
HORVU6Hr1G037000.1 Barley extracellular 63.11 61.76
TraesCS6B01G207200.1 Wheat extracellular 62.84 61.5
TraesCS6A01G177500.1 Wheat extracellular 62.57 61.23
KXG29757 Sorghum golgi 62.02 61.02
OQU87155 Sorghum golgi 62.3 60.8
Os02t0205200-01 Rice mitochondrion, nucleus, plastid 60.11 60.27
Zm00001d044455_P001 Maize plasma membrane 62.02 59.58
TraesCS6D01G166800.1 Wheat extracellular, golgi, vacuole 54.64 58.82
CDX79913 Canola cytosol 32.79 56.34
CDY48764 Canola cytosol 30.87 56.22
Os04t0494600-01 Rice extracellular 57.65 55.97
TraesCS2B01G455800.1 Wheat golgi 56.83 55.76
Os04t0494950-01 Rice extracellular, vacuole 56.56 55.65
TraesCS2D01G432500.1 Wheat extracellular, golgi 56.56 55.5
Zm00001d003183_P001 Maize extracellular, mitochondrion, plasma membrane, plastid 57.38 55.26
CDY28002 Canola extracellular 54.92 55.07
HORVU2Hr1G085440.1 Barley extracellular 56.83 55.03
CDY22149 Canola extracellular 54.64 54.79
CDY35979 Canola extracellular 54.64 54.79
TraesCS2B01G369800.1 Wheat extracellular 56.01 54.67
Zm00001d003186_P001 Maize extracellular 56.56 54.62
Os04t0494900-01 Rice extracellular 56.01 54.38
Os02t0527500-00 Rice plastid 19.4 54.2
TraesCS2A01G434700.1 Wheat golgi 55.19 54.16
TraesCS2A01G351600.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 55.74 54.11
TraesCS2D01G349800.1 Wheat mitochondrion 55.74 54.11
EES11052 Sorghum mitochondrion 56.01 54.09
TraesCS5B01G390400.1 Wheat plastid 44.81 53.42
Zm00001d003184_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, peroxisome 52.19 53.2
EES11053 Sorghum endoplasmic reticulum, extracellular, vacuole 54.64 53.05
EES11054 Sorghum extracellular, vacuole 54.37 52.65
TraesCS5D01G395400.1 Wheat extracellular 54.37 52.65
OQU81862 Sorghum cytosol, endoplasmic reticulum, golgi, mitochondrion 56.28 52.55
Os04t0495000-00 Rice extracellular, golgi, vacuole 53.55 52.55
TraesCS5A01G385400.1 Wheat extracellular 53.83 52.25
KXG26630 Sorghum extracellular 54.1 52.11
TraesCS2D01G349900.1 Wheat extracellular 51.91 52.05
TraesCS2B01G369500.1 Wheat cytosol 50.82 51.96
TraesCS2A01G351700.1 Wheat extracellular 51.64 51.78
TraesCS2B01G369900.1 Wheat extracellular 51.37 51.51
TraesCS2B01G369700.1 Wheat endoplasmic reticulum, golgi 53.28 51.45
TraesCS2D01G349700.1 Wheat endoplasmic reticulum, golgi, mitochondrion 53.01 51.19
CDY14785 Canola extracellular, vacuole 51.64 51.08
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 52.73 51.06
TraesCS2A01G351400.1 Wheat extracellular 52.46 50.93
CDY06908 Canola extracellular 51.64 50.53
TraesCS2D01G349500.1 Wheat extracellular 51.64 50.13
HORVU5Hr1G094750.2 Barley extracellular 52.73 50.0
TraesCS2B01G440300.1 Wheat extracellular 52.46 50.0
TraesCS2A01G351500.1 Wheat extracellular, golgi 51.64 49.87
TraesCS2A01G421300.1 Wheat extracellular 52.19 49.61
TraesCS2B01G369300.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.27 48.55
TraesCS2A01G351200.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.0 48.28
TraesCS2D01G349200.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.0 48.28
HORVU2Hr1G085370.2 Barley endoplasmic reticulum 46.99 45.26
KXG26629 Sorghum golgi 50.82 44.93
Zm00001d003187_P002 Maize endoplasmic reticulum, plasma membrane 48.63 44.84
Zm00001d025754_P001 Maize golgi 48.63 43.63
CDY48765 Canola extracellular 51.64 42.66
CDX84311 Canola plasma membrane 46.45 42.5
CDY17255 Canola plasma membrane 46.45 42.5
CDY26302 Canola extracellular, golgi, plasma membrane 46.72 41.81
CDX79912 Canola extracellular, vacuole 51.37 41.78
CDX99870 Canola plasma membrane 42.62 40.0
Zm00001d015715_P001 Maize plasma membrane 62.3 38.91
HORVU2Hr1G085340.2 Barley mitochondrion, plastid 52.19 38.2
HORVU2Hr1G085520.2 Barley extracellular 32.51 32.6
CDX78563 Canola extracellular, plasma membrane 32.24 30.65
CDX70545 Canola extracellular, vacuole 31.69 30.37
Os03t0328501-00 Rice plastid 25.68 30.23
Zm00001d003185_P001 Maize extracellular 56.56 29.91
Os04t0494800-01 Rice extracellular 19.95 19.26
Os07t0132600-00 Rice mitochondrion, nucleus, plastid 16.39 16.44
Protein Annotations
EnsemblPlants:CDX91217EnsemblPlantsGene:GSBRNA2T00152033001Gene3D:2.60.120.260InterPro:DUF642InterPro:Galactose-bd-like_sfInterPro:IPR008979
PANTHER:PTHR31265PANTHER:PTHR31265:SF23PFAM:PF04862ProteinID:CDX91217ProteinID:CDX91217.1SignalP:SignalP-noTM
SUPFAM:SSF49785UniParc:UPI0004EBECF5MapMan:35.2:::
Description
BnaC02g03800D
Coordinates
chrLK031865:-:1491428..1494186
Molecular Weight (calculated)
39800.9 Da
IEP (calculated)
6.915
GRAVY (calculated)
-0.001
Length
366 amino acids
Sequence
(BLAST)
001: MKGGTVSFLF VLLISTVTSI FCFRDGMLPN GDFELGPKPS DMKGTQVINK NAIPSWELTG FVEYIQSGQK QGDMLLVVPA GKFAVRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYLLPNS TTGVLIPPFI EDDHSPLPAW MVESLKAVKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TIIGKTYVLS FAVGDANNAC EGSMIVEAFA
301: GRDTLKVPYQ SKGKGGFKRA TLRFVAVSTR TRVMFYSTFY AMRSDDFSSL CGPVIDDVKL LSVHKA
Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Arabidopsis Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.