Factsheet for TraesCS5D01G395400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G385400.1	Wheat	extracellular	96.03	96.29
TraesCS5B01G390400.1	Wheat	plastid	76.72	94.46
HORVU5Hr1G094750.2	Barley	extracellular	94.44	92.49
TraesCS2D01G349500.1	Wheat	extracellular	82.01	82.23
Os04t0494600-01	Rice	extracellular	67.2	67.37
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	65.61	65.44
TraesCS2D01G349800.1	Wheat	mitochondrion	61.64	61.8
GSMUA_Achr1P14570_001	Banana	extracellular	58.99	60.6
TraesCS7D01G442500.1	Wheat	golgi	59.26	60.54
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	60.32	60.16
GSMUA_Achr2P08300_001	Banana	extracellular	57.94	59.35
TraesCS2D01G432500.1	Wheat	extracellular, golgi	56.88	57.64
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	59.79	56.93
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	51.06	56.76
TraesCS2D01G349900.1	Wheat	extracellular	54.76	56.71
PGSC0003DMT400074806	Potato	extracellular	55.03	56.06
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.97	55.89
KXG26629	Sorghum	golgi	61.11	55.8
Solyc08g067030.2.1	Tomato	extracellular	54.76	55.8
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	54.23	55.71
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	49.47	55.16
CDX68849	Canola	golgi	52.65	54.52
CDX91217	Canola	extracellular	52.65	54.37
CDX75247	Canola	golgi	52.38	54.25
Bra011349.1-P	Field mustard	golgi	52.38	54.25
Zm00001d025754_P001	Maize	golgi	58.2	53.92
CDX85713	Canola	extracellular	52.12	53.83
KRH05109	Soybean	nucleus	52.12	53.83
KRH16010	Soybean	nucleus	52.12	53.83
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	52.38	53.66
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	51.85	53.55
Bra009841.1-P	Field mustard	extracellular	51.85	53.41
CDX80511	Canola	extracellular	51.85	53.41
CDX88180	Canola	extracellular	51.85	53.41
Solyc06g067910.2.1	Tomato	nucleus	52.38	53.23
PGSC0003DMT400073388	Potato	mitochondrion	52.12	53.1
Bra020500.1-P	Field mustard	extracellular	51.32	53.01
CDY05493	Canola	extracellular	51.32	53.01
CDY19801	Canola	extracellular	51.85	52.97
Solyc03g120040.2.1	Tomato	extracellular, nucleus	35.98	52.71
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	47.09	52.35
CDX97108	Canola	golgi	50.53	52.19
PGSC0003DMT400014547	Potato	extracellular	50.79	52.17
PGSC0003DMT400073682	Potato	cytosol	45.77	51.64
KRH23537	Soybean	nucleus	50.26	50.8
KRH09784	Soybean	nucleus	50.26	50.8
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	54.23	50.62
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	50.79	50.53
KRH52489	Soybean	extracellular, golgi	48.94	50.0
KRH52488	Soybean	extracellular	47.88	49.59
KRH44408	Soybean	golgi	48.15	41.65
CDX80516	Canola	plastid	32.8	40.52
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	41.53	39.55
TraesCS3D01G294100.1	Wheat	plasma membrane	39.15	37.56

Protein Annotations

EnsemblPlants:TraesCS5D01G395400.1	EnsemblPlantsGene:TraesCS5D01G395400	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:463087279..463088615

Molecular Weight (calculated)

40368.7 Da

IEP (calculated)

6.234

GRAVY (calculated)

-0.106

Length

378 amino acids

Sequence
(BLAST)

001: MMLNGALFLL VCAAARAAAS GGDGPLLNGN FEYAPNRSQM NGTRVMAPNA IPYWKVTGFV EYIESGARQG DMVLTVPEGR HAVQLGTESS IRQQLSVTRG
101: KYYSITFSAA RTCAQSERLK VSVVPGDDDV ADELPIQTVY TSSGWDSYSW AFKAKQGVVS FIIHHGDDHA EDPACGPIID CVAIRALNPP RATPHNMLIN
201: GDFEEGPYIT PGSPWGVLVP PMDEDDTSPL PGWMVMSYSK VVKYIDSAHF RVPHGARAVE LVAGLEVALV QEVATVPGSS CRLQFSVGDA ANGCAASPMR
301: VQVATARGSK SVPYNSKGTG GYTRDALDFT ADGNSTRVVF YSSGYHTTSD GSGTLCGPVV DDVSLVCVSR PHARRLLR

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.