Factsheet for TraesCS2D01G432500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G434700.1	Wheat	golgi	95.44	95.44
TraesCS2B01G455800.1	Wheat	golgi	95.17	95.17
TraesCS2D01G349900.1	Wheat	extracellular	72.39	73.97
Os04t0495000-00	Rice	extracellular, golgi, vacuole	69.97	69.97
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	70.51	69.76
TraesCS2D01G349800.1	Wheat	mitochondrion	67.56	66.84
TraesCS7D01G442500.1	Wheat	golgi	63.54	64.05
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	60.86	59.89
GSMUA_Achr1P14570_001	Banana	extracellular	58.71	59.51
GSMUA_Achr2P08300_001	Banana	extracellular	58.71	59.35
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	53.62	58.82
PGSC0003DMT400014547	Potato	extracellular	57.37	58.15
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	52.81	58.11
PGSC0003DMT400074806	Potato	extracellular	56.84	57.14
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	56.03	57.1
TraesCS5D01G395400.1	Wheat	extracellular	57.64	56.88
Solyc08g067030.2.1	Tomato	extracellular	56.3	56.6
Solyc03g120040.2.1	Tomato	extracellular, nucleus	39.14	56.59
CDX91217	Canola	extracellular	55.5	56.56
CDX85713	Canola	extracellular	55.23	56.28
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	55.5	56.25
CDX75247	Canola	golgi	54.96	56.16
Bra011349.1-P	Field mustard	golgi	54.96	56.16
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	55.23	55.83
PGSC0003DMT400073388	Potato	mitochondrion	55.5	55.8
TraesCS2D01G349500.1	Wheat	extracellular	56.3	55.7
CDX68849	Canola	golgi	54.42	55.62
PGSC0003DMT400073682	Potato	cytosol	49.87	55.52
Solyc06g067910.2.1	Tomato	nucleus	55.23	55.38
Bra020500.1-P	Field mustard	extracellular	54.16	55.19
CDY05493	Canola	extracellular	54.16	55.19
CDX80511	Canola	extracellular	54.16	55.04
Bra009841.1-P	Field mustard	extracellular	54.16	55.04
CDX88180	Canola	extracellular	54.16	55.04
KRH16010	Soybean	nucleus	53.89	54.92
KRH05109	Soybean	nucleus	53.89	54.92
CDY19801	Canola	extracellular	54.42	54.86
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	49.87	54.71
CDX97108	Canola	golgi	53.62	54.64
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.35	54.52
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.42	53.56
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	53.62	52.63
KRH52489	Soybean	extracellular, golgi	52.01	52.43
KRH52488	Soybean	extracellular	51.21	52.33
KRH23537	Soybean	nucleus	52.01	51.87
KRH09784	Soybean	nucleus	52.01	51.87
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	55.5	51.11
KRH44408	Soybean	golgi	50.4	43.02
CDX80516	Canola	plastid	35.12	42.81
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	42.09	39.55
TraesCS3D01G294100.1	Wheat	plasma membrane	41.02	38.83

Protein Annotations

EnsemblPlants:TraesCS2D01G432500.1	EnsemblPlantsGene:TraesCS2D01G432500	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
TMHMM:TMhelix	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:544659991..544661336

Molecular Weight (calculated)

39959.7 Da

IEP (calculated)

7.150

GRAVY (calculated)

0.039

Length

373 amino acids

Sequence
(BLAST)

001: MARSTRSLAF FVLVALAVRA ISAVTDGLLP NGDFAQGPDK SEMNGTVVTA RHAIPSWEIS GFVEYIAPGH KEEDMILPLP AGASAVRLGN DAAIRQQLNV
101: TRHMFYSVSF MAARSCAQAE KLNVSVDPEF GVLPIQTVYT STGWDTYSWA FKARHSTGWL SIHNTGVEED PACGPLLIAV AIKTLYAPHH TKGNMLRNGD
201: FEQGPYIFPG TPWGVLVPPI TEDVHSPLSG WTVMSDTKVV KYVDAPHHAV PRGARAVELV AGREGALVQE VRTVPGRAYR LSFAVGDAAN GCSGSLVVEA
301: YAGRGTLRVP YESLGTGGST PAALEFTAVA NETRVVFQSS NHLMKSDATL CGPVVDDVSL VPVRVHAARR LRL

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.