Factsheet for TraesCS2D01G349500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G351400.1	Wheat	extracellular	95.76	95.76
TraesCS2B01G369500.1	Wheat	cytosol	88.06	92.74
TraesCS5D01G395400.1	Wheat	extracellular	82.23	82.01
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	89.66	67.6
Os04t0494600-01	Rice	extracellular	64.19	64.19
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	63.66	63.32
TraesCS2D01G349800.1	Wheat	mitochondrion	59.68	59.68
TraesCS7D01G442500.1	Wheat	golgi	57.29	58.38
GSMUA_Achr1P14570_001	Banana	extracellular	56.76	58.15
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	58.36	58.05
GSMUA_Achr2P08300_001	Banana	extracellular	55.7	56.91
TraesCS2D01G349900.1	Wheat	extracellular	54.91	56.71
TraesCS2D01G432500.1	Wheat	extracellular, golgi	55.7	56.3
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	59.15	56.17
KXG26629	Sorghum	golgi	60.48	55.07
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	49.34	54.71
Solyc08g067030.2.1	Tomato	extracellular	53.05	53.91
PGSC0003DMT400074806	Potato	extracellular	53.05	53.91
Zm00001d025754_P001	Maize	golgi	57.82	53.43
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	51.99	53.26
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	50.93	52.6
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	47.21	52.51
KRH05109	Soybean	nucleus	50.93	52.46
PGSC0003DMT400014547	Potato	extracellular	51.19	52.45
KRH16010	Soybean	nucleus	50.66	52.19
CDY19801	Canola	extracellular	51.19	52.16
Solyc03g120040.2.1	Tomato	extracellular, nucleus	35.54	51.94
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	50.4	51.91
CDX85713	Canola	extracellular	50.4	51.91
Bra009841.1-P	Field mustard	extracellular	50.4	51.77
CDX80511	Canola	extracellular	50.4	51.77
CDX88180	Canola	extracellular	50.4	51.77
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	50.66	51.76
CDX91217	Canola	extracellular	50.13	51.64
CDX68849	Canola	golgi	49.87	51.51
Bra011349.1-P	Field mustard	golgi	49.6	51.23
CDX75247	Canola	golgi	49.6	51.23
CDX97108	Canola	golgi	49.6	51.09
Solyc06g067910.2.1	Tomato	nucleus	50.13	50.81
KRH09784	Soybean	nucleus	50.4	50.8
KRH23537	Soybean	nucleus	50.4	50.8
PGSC0003DMT400073388	Potato	mitochondrion	49.87	50.67
CDY05493	Canola	extracellular	49.07	50.55
Bra020500.1-P	Field mustard	extracellular	49.07	50.55
KRH52489	Soybean	extracellular, golgi	49.07	50.0
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	45.09	50.0
PGSC0003DMT400073682	Potato	cytosol	43.77	49.25
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	49.07	48.68
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	52.25	48.64
KRH52488	Soybean	extracellular	46.95	48.49
KRH44408	Soybean	golgi	48.81	42.11
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	41.91	39.8
CDX80516	Canola	plastid	31.3	38.56
TraesCS3D01G294100.1	Wheat	plasma membrane	39.79	38.07

Protein Annotations

EnsemblPlants:TraesCS2D01G349500.1	EnsemblPlantsGene:TraesCS2D01G349500	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	MapMan:35.2

Description

No Description!

Coordinates

chr2D:+:446941349..446943204

Molecular Weight (calculated)

40352.8 Da

IEP (calculated)

7.095

GRAVY (calculated)

-0.131

Length

377 amino acids

Sequence
(BLAST)

001: MVLNGALFLL VCAAARAAAS GGDGPLLNGN FEQAPNRSQM NGSRVTGKYA IPHWKATGFV EYIECGAKQD HMVLVVPEGR HAVRLGTESS IEHQLSVTRG
101: KYYSVTFSAA RTCAQSEKLR VSIVPGDVSG GELPVQTVYT SSGWDSYAWA FKAQQGVVSL IIHHGDDQVD DPACGPIVDA VAIRMLNPPH ATHQNMLING
201: DFEEGPYMTP GSPWGVLVPP MDEDATSPLP GWAIMSHSKV VKYIDAAHFR VPHGSRAVEL VAGVEVALLQ EVATVPGRSY RLQFSVGDAG NRCAASPMSV
301: QVATAYGSKR VSYESHGTGG HVRDKLDFKA EGNSTRVVFY STGYHTASDR SGTLCGPVVD DVSLVSVSHP HARRLLR

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.