Factsheet for VIT_09s0002g05930.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	71.6	78.8
GSMUA_Achr1P14570_001	Banana	extracellular	67.16	73.91
PGSC0003DMT400073388	Potato	mitochondrion	66.91	73.05
Solyc06g067910.2.1	Tomato	nucleus	66.91	72.85
KRH23537	Soybean	nucleus	67.16	72.73
KRH09784	Soybean	nucleus	66.91	72.46
Solyc03g120040.2.1	Tomato	extracellular, nucleus	45.68	71.71
GSMUA_Achr2P08300_001	Banana	extracellular	64.2	70.46
PGSC0003DMT400014547	Potato	extracellular	63.7	70.11
PGSC0003DMT400073682	Potato	cytosol	57.78	69.85
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	62.47	68.94
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	61.23	67.57
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	63.21	67.37
Os01t0611000-01	Rice	extracellular	59.26	64.34
TraesCS7B01G353600.2	Wheat	extracellular	58.77	64.32
KXG29757	Sorghum	golgi	59.01	64.25
OQU87155	Sorghum	golgi	59.26	64.0
TraesCS7D01G442500.1	Wheat	golgi	58.27	63.78
TraesCS7A01G453100.1	Wheat	golgi	58.02	63.51
HORVU6Hr1G037000.1	Barley	extracellular	58.27	63.1
TraesCS6B01G207200.1	Wheat	extracellular	58.27	63.1
TraesCS6A01G177500.1	Wheat	extracellular	58.02	62.83
Zm00001d044455_P001	Maize	plasma membrane	58.02	61.68
KRH44408	Soybean	golgi	66.42	61.56
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	51.11	60.88
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	54.32	60.27
Os04t0494600-01	Rice	extracellular	55.06	59.15
Os04t0494950-01	Rice	extracellular, vacuole	53.58	58.33
TraesCS2B01G369800.1	Wheat	extracellular	53.33	57.6
Os04t0494900-01	Rice	extracellular	53.58	57.56
Zm00001d003186_P001	Maize	extracellular	53.83	57.52
TraesCS2D01G349800.1	Wheat	mitochondrion	52.84	56.76
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	52.84	56.76
HORVU2Hr1G085440.1	Barley	extracellular	52.84	56.61
EES11052	Sorghum	mitochondrion	52.84	56.46
Os02t0527500-00	Rice	plastid	18.02	55.73
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	53.83	55.61
KXG26630	Sorghum	extracellular	52.1	55.53
TraesCS2D01G432500.1	Wheat	extracellular, golgi	51.11	55.5
TraesCS2B01G455800.1	Wheat	golgi	51.11	55.5
EES11054	Sorghum	extracellular, vacuole	51.6	55.29
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	51.85	55.26
Os04t0495000-00	Rice	extracellular, golgi, vacuole	50.86	55.23
TraesCS2A01G434700.1	Wheat	golgi	50.86	55.23
TraesCS2B01G369500.1	Wheat	cytosol	48.4	54.75
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	50.62	54.38
TraesCS5D01G395400.1	Wheat	extracellular	50.62	54.23
VIT_13s0064g00460.t01	Wine grape	extracellular	48.15	54.17
TraesCS5A01G385400.1	Wheat	extracellular	50.37	54.11
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	50.62	54.09
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	50.62	54.09
TraesCS2D01G349900.1	Wheat	extracellular	48.64	53.97
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	50.37	53.97
TraesCS2B01G369900.1	Wheat	extracellular	48.4	53.7
TraesCS2A01G351700.1	Wheat	extracellular	48.15	53.42
TraesCS5B01G390400.1	Wheat	plastid	40.49	53.42
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	47.16	53.2
TraesCS2A01G351400.1	Wheat	extracellular	48.89	52.52
TraesCS2A01G351500.1	Wheat	extracellular, golgi	49.14	52.51
TraesCS2D01G349500.1	Wheat	extracellular	48.64	52.25
HORVU5Hr1G094750.2	Barley	extracellular	48.89	51.3
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.65	50.92
VIT_08s0007g08460.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	45.93	50.68
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.41	50.66
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.41	50.66
TraesCS2B01G440300.1	Wheat	extracellular	46.91	49.48
TraesCS2A01G421300.1	Wheat	extracellular	46.67	49.09
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	46.91	47.86
KXG26629	Sorghum	golgi	48.64	47.58
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	43.46	46.32
Zm00001d025754_P001	Maize	golgi	46.17	45.83
VIT_10s0003g03250.t01	Wine grape	extracellular, golgi, plasma membrane	41.73	43.11
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	49.14	39.8
Zm00001d015715_P001	Maize	plasma membrane	57.28	39.59
Os03t0328501-00	Rice	plastid	25.43	33.12
HORVU2Hr1G085520.2	Barley	extracellular	29.63	32.88
Zm00001d003185_P001	Maize	extracellular	52.35	30.64
VIT_14s0068g02080.t01	Wine grape	extracellular, plasma membrane, vacuole	26.42	26.95
Os04t0494800-01	Rice	extracellular	19.51	20.84
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	17.78	19.73

Protein Annotations

EntrezGene:100261739	wikigene:100261739	Gene3D:2.60.120.260	MapMan:35.2	ProteinID:CBI36253	ProteinID:CBI36253.3
UniProt:D7U0V7	InterPro:DUF642	EMBL:FN596494	InterPro:Galactose-bd-like_sf	InterPro:IPR008979	EntrezGene:LOC100261739
wikigene:LOC100261739	PFAM:PF04862	PANTHER:PTHR31265	PANTHER:PTHR31265:SF9	SUPFAM:SSF49785	SignalP:SignalP-noTM
UniParc:UPI0001BE4A2A	ArrayExpress:VIT_09s0002g05930	EnsemblPlantsGene:VIT_09s0002g05930	EnsemblPlants:VIT_09s0002g05930.t01	unigene:Vvi.15892	RefSeq:XP_002281322
RefSeq:XP_002281322.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:+:5746263..5749074

Molecular Weight (calculated)

44787.1 Da

IEP (calculated)

9.079

GRAVY (calculated)

-0.175

Length

405 amino acids

Sequence
(BLAST)

001: MWLKSRVLLL LLCATCHTAV SFTNGLLPNG NFEYGPKPWE MKGTKVMASR AIPKWEISGY VEYIKSGQKQ GDMLLIVPEG AYAVRLGNEA SIKQKVKVVK
101: GMYYSITFSA ARTCAQEETL NVSVAPNSEA NDWGMLPMQT MYSSNGWDSY AWGFQADDKE IAISIHNPGV AEDPACGPLI DSVALKALYP PRRTRANLLK
201: NGNFEEGPYV FPTASWGVLI PPNIEDDHSP LPGWMIESLK AVKYIDSDHF AVPEGKRGVE LVAGKESALS QVVFTIPNRV YVLSFSVGDA NNSCEGSMVV
301: EAFAGLDTVK VPYESKGKGG FKRAKLRFKA ISKRTRVMFL STYYTMKNDN SGSLCGPVLD DVKLLSVRKA RFAVTCLLKD NKNIKKLIKR GRQLEGEVCD
401: FWFNA

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.