Factsheet for HORVU5Hr1G094750.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G395400.1	Wheat	extracellular	92.49	94.44
TraesCS5A01G385400.1	Wheat	extracellular	90.67	92.84
TraesCS5B01G390400.1	Wheat	plastid	73.83	92.83
Os04t0494600-01	Rice	extracellular	63.73	65.25
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	80.05	61.8
HORVU2Hr1G085440.1	Barley	extracellular	58.81	60.05
GSMUA_Achr1P14570_001	Banana	extracellular	56.99	59.78
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	57.51	58.42
GSMUA_Achr2P08300_001	Banana	extracellular	55.7	58.27
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	56.99	58.2
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	59.07	57.43
KXG26629	Sorghum	golgi	60.1	56.04
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	52.07	55.07
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	48.45	55.0
PGSC0003DMT400074806	Potato	extracellular	52.59	54.72
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	52.07	54.62
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	47.93	54.57
Solyc08g067030.2.1	Tomato	extracellular	52.33	54.45
Zm00001d025754_P001	Maize	golgi	57.51	54.41
KRH05109	Soybean	nucleus	51.04	53.83
KRH16010	Soybean	nucleus	51.04	53.83
CDX68849	Canola	golgi	50.52	53.42
HORVU6Hr1G037000.1	Barley	extracellular	51.55	53.21
Bra011349.1-P	Field mustard	golgi	50.26	53.15
CDX75247	Canola	golgi	50.26	53.15
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	50.52	52.85
CDX91217	Canola	extracellular	50.0	52.73
Solyc06g067910.2.1	Tomato	nucleus	50.78	52.69
Bra009841.1-P	Field mustard	extracellular	50.0	52.59
CDX88180	Canola	extracellular	50.0	52.59
CDX80511	Canola	extracellular	50.0	52.59
PGSC0003DMT400073388	Potato	mitochondrion	50.52	52.56
Bra020500.1-P	Field mustard	extracellular	49.74	52.46
CDY05493	Canola	extracellular	49.74	52.46
Solyc03g120040.2.1	Tomato	extracellular, nucleus	34.97	52.33
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	49.48	52.19
CDX85713	Canola	extracellular	49.48	52.19
CDY19801	Canola	extracellular	50.0	52.16
PGSC0003DMT400014547	Potato	extracellular	49.22	51.63
CDX97108	Canola	golgi	47.93	50.55
KRH23537	Soybean	nucleus	48.96	50.53
KRH09784	Soybean	nucleus	48.96	50.53
PGSC0003DMT400073682	Potato	cytosol	43.78	50.45
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	48.96	49.74
KRH52488	Soybean	extracellular	46.89	49.59
KRH52489	Soybean	extracellular, golgi	47.15	49.19
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	51.3	48.89
CDX80516	Canola	plastid	32.12	40.52
KRH44408	Soybean	golgi	45.85	40.5
HORVU5Hr1G109880.2	Barley	golgi, vacuole	40.41	37.41
HORVU2Hr1G085520.2	Barley	extracellular	31.35	33.15
HORVU3Hr1G072860.3	Barley	plastid	37.05	31.5

Protein Annotations

EnsemblPlants:HORVU5Hr1G094750.2	EnsemblPlantsGene:HORVU5Hr1G094750	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
UniParc:UPI000B47B210	UniProt:A0A287SBQ7	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:596831417..596832768

Molecular Weight (calculated)

41143.5 Da

IEP (calculated)

6.839

GRAVY (calculated)

-0.148

Length

386 amino acids

Sequence
(BLAST)

001: MMLNGALFLL ACAAARAAAS GGDGPLLNGN FEYAPNRSQM NGTRVTGASA IPYWKVTGFV EYIESGARQG GMVLTVPEGR HAVQLGAGSS IRQQLSVTRG
101: KYYSITFSAA RTCAQSERLR VSVVPGDDDV ADELPIQTVY TSSGWDSYSW AFKAKQGAVS FIIHHGDDHE EDPACGPIVD CVAMRALNPP RATHSENKFR
201: RSHNMLVNGD FEEGPYITPG SPWGVLVPPM DEDDTSPLPG WMVMSYSKVV KYIDSAHFRV PHGARAVELV AGVEVALVQE VATVPGSSCR LQFSVGDAAN
301: GCVASPMRVQ VATARGSKSV PYSSKGTGGY ARDALDFTPD GNSTRVVFYS AGYHTTSDGS GTLCGPVVDD VSLVCVSRPH ARRLLR

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.