Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 6
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023324.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 87.7 | 94.41 |
| CDX91217 | Canola | extracellular | 92.62 | 92.62 |
| CDX85713 | Canola | extracellular | 92.35 | 92.35 |
| CDX97108 | Canola | golgi | 89.34 | 89.34 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 86.34 | 85.64 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 78.42 | 78.63 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 77.05 | 76.63 |
| KRH16010 | Soybean | nucleus | 74.59 | 74.59 |
| KRH05109 | Soybean | nucleus | 74.32 | 74.32 |
| Solyc08g067030.2.1 | Tomato | extracellular | 72.13 | 71.16 |
| PGSC0003DMT400074806 | Potato | extracellular | 71.58 | 70.62 |
| KRH52488 | Soybean | extracellular | 68.31 | 68.49 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 68.31 | 67.93 |
| GSMUA_Achr7P08400_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 67.76 | 67.57 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 68.03 | 67.48 |
| GSMUA_Achr2P17020_001 | Banana | endoplasmic reticulum, vacuole | 67.49 | 67.3 |
| KRH52489 | Soybean | extracellular, golgi | 67.49 | 66.76 |
| TraesCS7D01G442500.1 | Wheat | golgi | 65.03 | 64.32 |
| TraesCS7B01G353600.2 | Wheat | extracellular | 65.03 | 64.32 |
| TraesCS7A01G453100.1 | Wheat | golgi | 64.75 | 64.05 |
| Os01t0611000-01 | Rice | extracellular | 65.03 | 63.81 |
| AT1G80240.1 | Thale cress | endoplasmic reticulum | 63.39 | 62.7 |
| KXG29757 | Sorghum | golgi | 63.11 | 62.1 |
| HORVU6Hr1G037000.1 | Barley | extracellular | 63.39 | 62.03 |
| TraesCS6B01G207200.1 | Wheat | extracellular | 63.39 | 62.03 |
| TraesCS6A01G177500.1 | Wheat | extracellular | 62.84 | 61.5 |
| OQU87155 | Sorghum | golgi | 62.84 | 61.33 |
| Os02t0205200-01 | Rice | mitochondrion, nucleus, plastid | 60.38 | 60.55 |
| Zm00001d044455_P001 | Maize | plasma membrane | 62.84 | 60.37 |
| TraesCS6D01G166800.1 | Wheat | extracellular, golgi, vacuole | 55.19 | 59.41 |
| Os04t0494950-01 | Rice | extracellular, vacuole | 57.65 | 56.72 |
| Os04t0494600-01 | Rice | extracellular | 57.92 | 56.23 |
| TraesCS2B01G455800.1 | Wheat | golgi | 57.1 | 56.03 |
| TraesCS2D01G432500.1 | Wheat | extracellular, golgi | 57.1 | 56.03 |
| TraesCS2A01G434700.1 | Wheat | golgi | 56.01 | 54.96 |
| Zm00001d003186_P001 | Maize | extracellular | 56.83 | 54.88 |
| TraesCS2B01G369800.1 | Wheat | extracellular | 56.01 | 54.67 |
| EES11052 | Sorghum | mitochondrion | 56.56 | 54.62 |
| HORVU2Hr1G085440.1 | Barley | extracellular | 56.28 | 54.5 |
| Zm00001d003183_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 56.56 | 54.47 |
| TraesCS2A01G351600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 55.74 | 54.11 |
| Os04t0494900-01 | Rice | extracellular | 55.74 | 54.11 |
| TraesCS2D01G349800.1 | Wheat | mitochondrion | 55.74 | 54.11 |
| Os02t0527500-00 | Rice | plastid | 19.13 | 53.44 |
| AT3G08030.1 | Thale cress | extracellular | 53.28 | 53.42 |
| Zm00001d003184_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 52.19 | 53.2 |
| TraesCS5B01G390400.1 | Wheat | plastid | 44.54 | 53.09 |
| Os04t0495000-00 | Rice | extracellular, golgi, vacuole | 53.83 | 52.81 |
| EES11053 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 54.37 | 52.79 |
| KXG26630 | Sorghum | extracellular | 54.64 | 52.63 |
| OQU81862 | Sorghum | cytosol, endoplasmic reticulum, golgi, mitochondrion | 56.28 | 52.55 |
| TraesCS2B01G369500.1 | Wheat | cytosol | 51.37 | 52.51 |
| EES11054 | Sorghum | extracellular, vacuole | 54.1 | 52.38 |
| TraesCS2D01G349900.1 | Wheat | extracellular | 52.19 | 52.33 |
| TraesCS2D01G349700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 54.1 | 52.24 |
| TraesCS2B01G369700.1 | Wheat | endoplasmic reticulum, golgi | 54.1 | 52.24 |
| AT2G41800.1 | Thale cress | extracellular, vacuole | 52.73 | 52.16 |
| TraesCS5D01G395400.1 | Wheat | extracellular | 53.55 | 51.85 |
| HORVU2Hr1G085430.1 | Barley | endoplasmic reticulum, golgi | 53.28 | 51.59 |
| TraesCS2A01G351700.1 | Wheat | extracellular | 51.37 | 51.51 |
| TraesCS2B01G369900.1 | Wheat | extracellular | 51.37 | 51.51 |
| TraesCS5A01G385400.1 | Wheat | extracellular | 53.01 | 51.46 |
| TraesCS2A01G351400.1 | Wheat | extracellular | 53.01 | 51.46 |
| TraesCS2A01G351500.1 | Wheat | extracellular, golgi | 52.73 | 50.92 |
| AT2G41810.1 | Thale cress | extracellular, vacuole | 51.37 | 50.81 |
| TraesCS2B01G440300.1 | Wheat | extracellular | 53.28 | 50.78 |
| TraesCS2A01G421300.1 | Wheat | extracellular | 53.28 | 50.65 |
| TraesCS2D01G349500.1 | Wheat | extracellular | 51.91 | 50.4 |
| HORVU5Hr1G094750.2 | Barley | extracellular | 52.19 | 49.48 |
| TraesCS2A01G351200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 50.0 | 48.28 |
| TraesCS2D01G349200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.73 | 48.02 |
| TraesCS2B01G369300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.73 | 48.02 |
| Zm00001d003187_P002 | Maize | endoplasmic reticulum, plasma membrane | 49.73 | 45.84 |
| KXG26629 | Sorghum | golgi | 51.37 | 45.41 |
| HORVU2Hr1G085370.2 | Barley | endoplasmic reticulum | 46.45 | 44.74 |
| Zm00001d025754_P001 | Maize | golgi | 49.73 | 44.61 |
| AT2G34510.1 | Thale cress | vacuole | 46.99 | 42.89 |
| AT1G29980.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 47.27 | 42.51 |
| Zm00001d015715_P001 | Maize | plasma membrane | 63.11 | 39.42 |
| HORVU2Hr1G085340.2 | Barley | mitochondrion, plastid | 52.73 | 38.6 |
| HORVU2Hr1G085520.2 | Barley | extracellular | 32.51 | 32.6 |
| Os03t0328501-00 | Rice | plastid | 26.23 | 30.87 |
| AT5G14150.2 | Thale cress | extracellular, plasma membrane, vacuole | 31.97 | 30.55 |
| Zm00001d003185_P001 | Maize | extracellular | 56.28 | 29.77 |
| Os04t0494800-01 | Rice | extracellular | 18.58 | 17.94 |
| Os07t0132600-00 | Rice | mitochondrion, nucleus, plastid | 17.49 | 17.53 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:35.2 | EntrezGene:831013 | UniProt:A0A178UK33 | ProteinID:AED91677.1 | ArrayExpress:AT5G11420 |
| EnsemblPlantsGene:AT5G11420 | RefSeq:AT5G11420 | TAIR:AT5G11420 | RefSeq:AT5G11420-TAIR-G | EnsemblPlants:AT5G11420.1 | TAIR:AT5G11420.1 |
| EMBL:AY046047 | EMBL:AY096359 | Unigene:At.21285 | ProteinID:CAB87702.1 | InterPro:DUF642 | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0009505 | GO:GO:0030312 | InterPro:Galactose-bd-like_sf |
| InterPro:IPR008979 | RefSeq:NP_196703.1 | ProteinID:OAO93975.1 | PFAM:PF04862 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31265 |
| PANTHER:PTHR31265:SF23 | UniProt:Q9LYE7 | SUPFAM:SSF49785 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000009CFFE |
Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
Coordinates
chr5:+:3644547..3647411
Molecular Weight (calculated)
39642.7 Da
IEP (calculated)
7.840
GRAVY (calculated)
-0.003
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.