Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006241.1-P | Field mustard | extracellular, plasma membrane | 86.16 | 85.71 |
| CDX78563 | Canola | extracellular, plasma membrane | 86.16 | 85.71 |
| CDX70545 | Canola | extracellular, vacuole | 85.12 | 85.34 |
| VIT_14s0068g02080.t01 | Wine grape | extracellular, plasma membrane, vacuole | 54.83 | 52.9 |
| GSMUA_Achr6P12280_001 | Banana | cytosol, peroxisome, plasma membrane | 21.67 | 39.71 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 31.07 | 32.25 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 30.55 | 31.97 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 29.5 | 30.96 |
| AT2G34510.1 | Thale cress | vacuole | 31.59 | 30.17 |
| AT3G08030.1 | Thale cress | extracellular | 28.72 | 30.14 |
| AT2G41800.1 | Thale cress | extracellular, vacuole | 28.98 | 30.0 |
| AT2G41810.1 | Thale cress | extracellular, vacuole | 28.98 | 30.0 |
| AT1G80240.1 | Thale cress | endoplasmic reticulum | 28.72 | 29.73 |
| AT1G29980.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 31.33 | 29.48 |
Protein Annotations
| MapMan:35.2 | EntrezGene:831265 | ProteinID:AED91993.1 | ProteinID:ANM70968.1 | ArrayExpress:AT5G14150 | EnsemblPlantsGene:AT5G14150 |
| RefSeq:AT5G14150 | TAIR:AT5G14150 | RefSeq:AT5G14150-TAIR-G | EnsemblPlants:AT5G14150.2 | Unigene:At.31968 | ProteinID:BAB08294.1 |
| InterPro:DUF642 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0031225 | RefSeq:NP_001332535.1 | RefSeq:NP_196919.1 |
| PFAM:PF04862 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF4 | UniProt:Q9FMT6 | SignalP:SignalP-noTM | UniParc:UPI00000AB297 |
Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FMT6]
Coordinates
chr5:-:4565135..4566988
Molecular Weight (calculated)
40905.0 Da
IEP (calculated)
4.218
GRAVY (calculated)
0.063
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIWFQRIFL LLLVSCCASS DFLENPDFES PPLNLPTNSN ASSVSLDQNS TLPGWTFQGT VLYVELPDTG HAVQLGEDGK INQTFIAKGD ELNYILTFAL
101: IHAGQNCTSS AGLSVSGPDS NAVFSYRQNY SKVSWQSYSH NLGSWGNGEP INLVLESQAI DSDSDTNSTC WPIIDTLLIK TVGVTLVQDS GNLLINGGFE
201: SGPGFLPNST DGVLIDAVPS LIQSPLRQWS VIGTVRYIDS EHFHVPEGKA AIEILSNTAP SGIQTATKGT SEGSRYNLTF TLGDANDACR GHFVVGAQAG
301: SVTQNFTLES NGTGSGEKFG LVFEADKDAA QISFTSYSVT MTKENVVCGP VIDEVMVHPL GGTASVKPTW LLLIFALLYV AVL
101: IHAGQNCTSS AGLSVSGPDS NAVFSYRQNY SKVSWQSYSH NLGSWGNGEP INLVLESQAI DSDSDTNSTC WPIIDTLLIK TVGVTLVQDS GNLLINGGFE
201: SGPGFLPNST DGVLIDAVPS LIQSPLRQWS VIGTVRYIDS EHFHVPEGKA AIEILSNTAP SGIQTATKGT SEGSRYNLTF TLGDANDACR GHFVVGAQAG
301: SVTQNFTLES NGTGSGEKFG LVFEADKDAA QISFTSYSVT MTKENVVCGP VIDEVMVHPL GGTASVKPTW LLLIFALLYV AVL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.