Factsheet for TraesCS2A01G351600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, secretory
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G349800.1	Wheat	mitochondrion	96.29	96.29
TraesCS2B01G369800.1	Wheat	extracellular	94.96	95.47
HORVU2Hr1G085440.1	Barley	extracellular	94.16	93.92
Os04t0494950-01	Rice	extracellular, vacuole	73.47	74.46
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	73.47	70.66
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	69.5	68.95
TraesCS2A01G434700.1	Wheat	golgi	67.11	67.83
TraesCS7A01G453100.1	Wheat	golgi	65.78	67.03
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	63.13	66.3
EES11054	Sorghum	extracellular, vacuole	66.05	65.87
TraesCS2A01G351700.1	Wheat	extracellular	62.07	64.11
TraesCS5A01G385400.1	Wheat	extracellular	61.8	61.8
GSMUA_Achr1P14570_001	Banana	extracellular	59.95	61.41
TraesCS2A01G351500.1	Wheat	extracellular, golgi	61.27	60.95
GSMUA_Achr2P08300_001	Banana	extracellular	58.89	60.16
TraesCS2A01G351400.1	Wheat	extracellular	59.95	59.95
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	53.05	59.0
Solyc03g120040.2.1	Tomato	extracellular, nucleus	39.52	57.75
PGSC0003DMT400074806	Potato	extracellular	56.5	57.41
Solyc08g067030.2.1	Tomato	extracellular	56.23	57.14
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	51.46	57.06
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	55.17	56.52
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	56.76	56.46
PGSC0003DMT400014547	Potato	extracellular	54.91	56.25
TraesCS6A01G177500.1	Wheat	extracellular	55.7	56.15
PGSC0003DMT400073388	Potato	mitochondrion	54.91	55.8
Bra020500.1-P	Field mustard	extracellular	54.11	55.74
CDX91217	Canola	extracellular	54.11	55.74
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	54.11	55.74
CDY05493	Canola	extracellular	54.11	55.74
Solyc06g067910.2.1	Tomato	nucleus	54.64	55.38
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.58	55.34
KRH05109	Soybean	nucleus	53.58	55.19
KRH16010	Soybean	nucleus	53.58	55.19
CDX75247	Canola	golgi	53.05	54.79
Bra011349.1-P	Field mustard	golgi	53.05	54.79
CDX68849	Canola	golgi	53.05	54.79
CDX88180	Canola	extracellular	53.32	54.77
Bra009841.1-P	Field mustard	extracellular	53.32	54.77
CDX80511	Canola	extracellular	53.32	54.77
CDX97108	Canola	golgi	53.05	54.64
CDX85713	Canola	extracellular	53.05	54.64
KRH52489	Soybean	extracellular, golgi	53.58	54.59
CDY19801	Canola	extracellular	53.58	54.59
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	53.32	54.47
PGSC0003DMT400073682	Potato	cytosol	48.28	54.33
KRH52488	Soybean	extracellular	51.99	53.7
TraesCS2A01G421300.1	Wheat	extracellular	54.38	53.25
KRH23537	Soybean	nucleus	52.52	52.94
KRH09784	Soybean	nucleus	52.52	52.94
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	56.76	52.84
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	52.52	52.11
KRH44408	Soybean	golgi	51.99	44.85
CDX80516	Canola	plastid	33.69	41.5
TraesCS5A01G458700.1	Wheat	extracellular, golgi	44.03	38.43
TraesCS3A01G294300.1	Wheat	extracellular, golgi, plasma membrane	40.05	38.23
Zm00001d003185_P001	Maize	extracellular	67.37	36.71

Protein Annotations

EnsemblPlants:TraesCS2A01G351600.1	EnsemblPlantsGene:TraesCS2A01G351600	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:591607032..591609128

Molecular Weight (calculated)

40809.1 Da

IEP (calculated)

8.631

GRAVY (calculated)

-0.038

Length

377 amino acids

Sequence
(BLAST)

001: MGMAEGMRRR CITLLVLVGV AARAASAVTD GLLPNGNFKD GPAKSQLNGT VVMGRHSIPN WEISGFVEYI QSGHTQDDMI VAVPEGASAV RLGNDASIRQ
101: NIRVTRRAYY SITFSAARTC AQAEKLNVSV AADSGVLPVQ TVYSSGGWDS YSWAFRAKHS AVWLAIHNPG VEEDPACGPV IDAIAIKTLQ PPTKTKGNML
201: RNGDFEDGPY IFPDCPWGVL VPPMDEDNCS PLPGWMVMSS TKVVKYVDAP RYRVPHGARA VELVAGRETA LVQEVATVAG RSYRLQFYVG DAANGCKESM
301: VVEAYVAAAS LKVQYQSQGT GGYRRAMLDF VAIGNLTRVV FQSLHHHMKV DGTLCGPVVD DISLVSVRKR AARRLFM

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.