Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 6
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G442500.1 | Wheat | golgi | 97.84 | 97.84 |
| TraesCS7B01G353600.2 | Wheat | extracellular | 97.84 | 97.84 |
| OQU87155 | Sorghum | golgi | 85.95 | 84.8 |
| Os01t0611000-01 | Rice | extracellular | 85.41 | 84.72 |
| Zm00001d044455_P001 | Maize | plasma membrane | 83.51 | 81.1 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 68.11 | 68.48 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 67.84 | 68.02 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 67.57 | 67.93 |
| Bra023324.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 61.62 | 67.06 |
| TraesCS2A01G351600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 67.03 | 65.78 |
| Bra011349.1-P | Field mustard | golgi | 64.05 | 64.93 |
| CDX75247 | Canola | golgi | 64.05 | 64.93 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 64.05 | 64.75 |
| CDX68849 | Canola | golgi | 63.78 | 64.66 |
| KRH05109 | Soybean | nucleus | 63.78 | 64.48 |
| KRH16010 | Soybean | nucleus | 63.78 | 64.48 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 63.51 | 64.38 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 58.92 | 64.31 |
| CDX85713 | Canola | extracellular | 62.7 | 63.39 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 62.97 | 63.14 |
| CDX91217 | Canola | extracellular | 62.43 | 63.11 |
| PGSC0003DMT400074806 | Potato | extracellular | 63.24 | 63.07 |
| CDY19801 | Canola | extracellular | 62.97 | 62.97 |
| CDX97108 | Canola | golgi | 62.16 | 62.84 |
| Solyc08g067030.2.1 | Tomato | extracellular | 62.97 | 62.8 |
| CDX88180 | Canola | extracellular | 62.16 | 62.67 |
| CDX80511 | Canola | extracellular | 62.16 | 62.67 |
| Bra009841.1-P | Field mustard | extracellular | 62.16 | 62.67 |
| TraesCS2A01G434700.1 | Wheat | golgi | 62.97 | 62.47 |
| Solyc03g120040.2.1 | Tomato | extracellular, nucleus | 42.97 | 61.63 |
| TraesCS6A01G177500.1 | Wheat | extracellular | 62.16 | 61.5 |
| TraesCS2A01G351500.1 | Wheat | extracellular, golgi | 62.97 | 61.48 |
| CDY05493 | Canola | extracellular | 60.54 | 61.2 |
| Bra020500.1-P | Field mustard | extracellular | 60.54 | 61.2 |
| PGSC0003DMT400014547 | Potato | extracellular | 60.27 | 60.6 |
| KRH52489 | Soybean | extracellular, golgi | 59.73 | 59.73 |
| Solyc06g067910.2.1 | Tomato | nucleus | 60.0 | 59.68 |
| TraesCS2A01G351700.1 | Wheat | extracellular | 58.65 | 59.45 |
| TraesCS2A01G351400.1 | Wheat | extracellular | 60.54 | 59.42 |
| TraesCS5A01G385400.1 | Wheat | extracellular | 60.54 | 59.42 |
| PGSC0003DMT400073388 | Potato | mitochondrion | 59.46 | 59.3 |
| KRH52488 | Soybean | extracellular | 58.11 | 58.9 |
| KRH09784 | Soybean | nucleus | 58.92 | 58.29 |
| KRH23537 | Soybean | nucleus | 58.92 | 58.29 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 63.51 | 58.02 |
| PGSC0003DMT400073682 | Potato | cytosol | 51.62 | 57.01 |
| Solyc12g042930.1.1 | Tomato | endoplasmic reticulum, golgi | 57.3 | 55.79 |
| TraesCS2A01G421300.1 | Wheat | extracellular | 56.49 | 54.29 |
| TraesCS2A01G351200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 54.86 | 53.56 |
| CDX80516 | Canola | plastid | 39.46 | 47.71 |
| KRH44408 | Soybean | golgi | 56.22 | 47.6 |
| TraesCS3A01G294300.1 | Wheat | extracellular, golgi, plasma membrane | 44.59 | 41.77 |
| TraesCS5A01G458700.1 | Wheat | extracellular, golgi | 48.65 | 41.67 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G453100.1 | EnsemblPlantsGene:TraesCS7A01G453100 | Gene3D:2.60.120.260 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 |
| PANTHER:PTHR31265 | PANTHER:PTHR31265:SF12 | PFAM:PF04862 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF49785 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:646956335..646958750
Molecular Weight (calculated)
39652.9 Da
IEP (calculated)
8.426
GRAVY (calculated)
0.070
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCAVLLLLV FAAARAAAVV TDGLLPNGNF ELGPAKSELV NGTVVKGGKA IPRWETSGFV EYIESGHKQG DMLLVVPQGA YAVRLGNDAS ILQRIPVARG
101: SYYAITFSAA RTCAQAERLN VSVSPESGVL PMQTIYGSNG WDSYAWAFKA KLDVVELVLH NPGVEEDPAC GPLVDAVAIR TLYPPTLSKG NMLKNGGFEE
201: GPYFLPNASW GVLVPPNIED DHSPLPAWMI MSSKAVKYVD AAHFKVPEGA RAVELVGGKE SALVQEVRTV PGWAYRLSFA VGDSADGCMG SMVAEAYAAR
301: STLKVPYESK GAGGYKRAVL DFVAVRDRTR VVFQSAFYHM KADGTLCGPV IDDAKLVGLR KKPAARRLML
101: SYYAITFSAA RTCAQAERLN VSVSPESGVL PMQTIYGSNG WDSYAWAFKA KLDVVELVLH NPGVEEDPAC GPLVDAVAIR TLYPPTLSKG NMLKNGGFEE
201: GPYFLPNASW GVLVPPNIED DHSPLPAWMI MSSKAVKYVD AAHFKVPEGA RAVELVGGKE SALVQEVRTV PGWAYRLSFA VGDSADGCMG SMVAEAYAAR
301: STLKVPYESK GAGGYKRAVL DFVAVRDRTR VVFQSAFYHM KADGTLCGPV IDDAKLVGLR KKPAARRLML
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Arabidopsis Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]
SUBAcon: [extracellular,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.