Factsheet for TraesCS5A01G385400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G395400.1	Wheat	extracellular	96.29	96.03
TraesCS5B01G390400.1	Wheat	plastid	76.39	93.81
HORVU5Hr1G094750.2	Barley	extracellular	92.84	90.67
TraesCS2A01G351400.1	Wheat	extracellular	81.96	81.96
Os04t0494600-01	Rice	extracellular	66.58	66.58
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	66.58	66.23
TraesCS2A01G421300.1	Wheat	extracellular	66.58	65.19
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	61.8	61.8
TraesCS7A01G453100.1	Wheat	golgi	59.42	60.54
GSMUA_Achr1P14570_001	Banana	extracellular	58.62	60.05
GSMUA_Achr2P08300_001	Banana	extracellular	57.56	58.81
TraesCS2A01G351500.1	Wheat	extracellular, golgi	58.89	58.58
TraesCS2A01G434700.1	Wheat	golgi	56.5	57.1
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	59.95	56.93
TraesCS2A01G351700.1	Wheat	extracellular	54.64	56.44
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	50.66	56.18
KXG26629	Sorghum	golgi	61.27	55.8
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	49.6	55.16
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.32	55.07
PGSC0003DMT400074806	Potato	extracellular	54.11	54.99
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	53.58	54.89
Solyc08g067030.2.1	Tomato	extracellular	53.85	54.72
TraesCS6A01G177500.1	Wheat	extracellular	53.58	54.01
Zm00001d025754_P001	Maize	golgi	58.36	53.92
CDX91217	Canola	extracellular	52.25	53.83
CDX68849	Canola	golgi	51.99	53.7
CDX75247	Canola	golgi	51.72	53.42
Bra011349.1-P	Field mustard	golgi	51.72	53.42
CDX80511	Canola	extracellular	51.99	53.41
Bra009841.1-P	Field mustard	extracellular	51.99	53.41
CDX88180	Canola	extracellular	51.99	53.41
KRH16010	Soybean	nucleus	51.72	53.28
KRH05109	Soybean	nucleus	51.72	53.28
CDX85713	Canola	extracellular	51.72	53.28
Solyc06g067910.2.1	Tomato	nucleus	52.52	53.23
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	51.99	53.12
PGSC0003DMT400073388	Potato	mitochondrion	52.25	53.1
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	51.46	53.01
Bra020500.1-P	Field mustard	extracellular	51.46	53.01
CDY05493	Canola	extracellular	51.46	53.01
CDY19801	Canola	extracellular	51.99	52.97
Solyc03g120040.2.1	Tomato	extracellular, nucleus	36.07	52.71
CDX97108	Canola	golgi	50.13	51.64
PGSC0003DMT400014547	Potato	extracellular	50.4	51.63
KRH23537	Soybean	nucleus	50.66	51.07
KRH09784	Soybean	nucleus	50.66	51.07
PGSC0003DMT400073682	Potato	cytosol	45.36	51.04
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	54.11	50.37
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	50.66	50.26
KRH52489	Soybean	extracellular, golgi	48.28	49.19
KRH52488	Soybean	extracellular	47.48	49.04
KRH44408	Soybean	golgi	48.28	41.65
CDX80516	Canola	plastid	33.16	40.85
TraesCS3A01G294300.1	Wheat	extracellular, golgi, plasma membrane	39.52	37.72
TraesCS5A01G458700.1	Wheat	extracellular, golgi	41.64	36.34

Protein Annotations

EnsemblPlants:TraesCS5A01G385400.1	EnsemblPlantsGene:TraesCS5A01G385400	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:582980722..582982214

Molecular Weight (calculated)

40261.6 Da

IEP (calculated)

6.504

GRAVY (calculated)

-0.090

Length

377 amino acids

Sequence
(BLAST)

001: MLNGALFLLV CAAARAAASG GDGPLLNGNF EYAPNRSQMN GSRVMAANAI PYWKVTGFVE YIESGARQGD MVLTVPEGRH AVQLGTDSSI RQQLSVTRGK
101: YYSITFSAAR TCAQSERLKV SVVPGDDVVA DELPVQTVYT SSGWDSYSWA FKAKQGVVSF IIHHGDDHAE DPACGPVIDC VAIRALNPPR ATRNNMLING
201: DFEEGPYITP GSPWGVLVPP MDEDDTSPLP GWMVMSYSKV VKYIDSAHFR VPHGTRAVEL VAGVEVALVQ EVATVPGSSC RLQFSVGDAA NGCVASPMRV
301: QVATARGSKS VPYNSKGTGG YTRDALDFTA DGNTTRVVFY SSGYHTTSDG SGTLCGPVID DVSLVCISRP HARRLLR

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.