CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

cytosol 1
extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G432500.1	Wheat	extracellular, golgi	69.76	70.51
TraesCS2B01G455800.1	Wheat	golgi	69.23	69.97
TraesCS2A01G434700.1	Wheat	golgi	67.64	68.36
EES11054	Sorghum	extracellular, vacuole	67.9	67.72
TraesCS2D01G349900.1	Wheat	extracellular	64.99	67.12
TraesCS2B01G369900.1	Wheat	extracellular	64.19	66.3
Os04t0495000-00	Rice	extracellular, golgi, vacuole	65.52	66.22
TraesCS2A01G351700.1	Wheat	extracellular	63.13	65.21
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	67.64	65.05
OQU87155	Sorghum	golgi	60.48	60.8
GSMUA_Achr1P14570_001	Banana	extracellular	58.62	60.05
EES11052	Sorghum	mitochondrion	60.21	59.89
KXG26630	Sorghum	extracellular	59.68	59.21
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	53.32	59.12
GSMUA_Achr2P08300_001	Banana	extracellular	57.56	58.81
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	51.46	57.23
PGSC0003DMT400074806	Potato	extracellular	54.64	55.53
Solyc08g067030.2.1	Tomato	extracellular	54.38	55.26
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	53.85	55.16
PGSC0003DMT400073682	Potato	cytosol	48.81	54.93
CDX85713	Canola	extracellular	53.32	54.92
Solyc03g120040.2.1	Tomato	extracellular, nucleus	37.4	54.65
CDX91217	Canola	extracellular	53.05	54.64
KXG29757	Sorghum	golgi	53.85	54.57
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	52.79	54.37
KRH16010	Soybean	nucleus	52.79	54.37
KRH05109	Soybean	nucleus	52.79	54.37
PGSC0003DMT400014547	Potato	extracellular	53.05	54.35
CDX97108	Canola	golgi	52.52	54.1
Bra011349.1-P	Field mustard	golgi	51.72	53.42
CDX68849	Canola	golgi	51.72	53.42
CDX75247	Canola	golgi	51.72	53.42
Bra009841.1-P	Field mustard	extracellular	51.72	53.13
CDX88180	Canola	extracellular	51.72	53.13
CDX80511	Canola	extracellular	51.72	53.13
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	51.99	53.12
PGSC0003DMT400073388	Potato	mitochondrion	52.25	53.1
Bra020500.1-P	Field mustard	extracellular	51.46	53.01
CDY05493	Canola	extracellular	51.46	53.01
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	51.19	52.88
CDY19801	Canola	extracellular	51.72	52.7
Solyc06g067910.2.1	Tomato	nucleus	51.99	52.69
KRH52489	Soybean	extracellular, golgi	50.93	51.89
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	51.99	51.58
KRH52488	Soybean	extracellular	49.6	51.23
KRH09784	Soybean	nucleus	50.4	50.8
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	54.38	50.62
KRH23537	Soybean	nucleus	50.13	50.53
KXG26629	Sorghum	golgi	53.85	49.03
KRH44408	Soybean	golgi	51.19	44.16
EER93244	Sorghum	extracellular, vacuole	41.91	40.93
HORVU2Hr1G085520.2	Barley	extracellular	38.99	40.27
CDX80516	Canola	plastid	31.83	39.22
EES01494	Sorghum	plasma membrane	41.11	38.94

Protein Annotations

EnsemblPlants:EES11053	EnsemblPlantsGene:SORBI_3006G133300	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	ProteinID:EES11053	ProteinID:EES11053.2	SEG:seg
SignalP:SignalP-TM	SUPFAM:SSF49785	TMHMM:TMhelix	UniParc:UPI00081AB614	UniProt:C5YBF4	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:+:49682723..49685907

Molecular Weight (calculated)

41430.3 Da

IEP (calculated)

7.035

GRAVY (calculated)

-0.219

Length

377 amino acids

Sequence
(BLAST)

001: MEPTTMVARR SVAFVILLIA VAARAVFAIT EGLLPNGHFE QGPAKSEMNG TRVLGRYSIP HWEISGFLEY IESGQKQDDM LLQVPEGERA VRLGNDATIQ
101: QQLAVTRHTY YSITFSASRT CAQAEKLNVS VTPESGVLPI QTVYTSSGWD SYSWAFKARH STVWLSIHNP GHEENPACGP LIDRVAVKTL RSPHHVKTDN
201: MLRNGDFEDG PYIFADTPWG VLVPPITEDE HSPLPGWMIM SDTKVVKYVD APHHAVPRGA GAVELVAGRE CALVQEVRTV PRRSYKLSFA VGDAANGCEG
301: NLAVDVSAGR AAKLNVPYES HGTGGYKRAE LEFVATDNLT RVVFQSANHY TKSDATLCGP IIDDVRLVPV HARRRRM

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.