Factsheet for Os04t0494900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11052	Sorghum	mitochondrion	75.6	75.2
Zm00001d003186_P001	Maize	extracellular	74.54	74.14
KXG26630	Sorghum	extracellular	74.01	73.42
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	72.15	71.77
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	71.88	71.69
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	71.62	71.24
TraesCS2A01G351500.1	Wheat	extracellular, golgi	71.35	70.98
Os04t0494600-01	Rice	extracellular	67.11	67.11
Os01t0611000-01	Rice	extracellular	65.78	66.49
Os04t0494950-01	Rice	extracellular, vacuole	63.66	64.52
GSMUA_Achr1P14570_001	Banana	extracellular	62.86	64.4
GSMUA_Achr2P08300_001	Banana	extracellular	62.07	63.41
Os04t0495000-00	Rice	extracellular, golgi, vacuole	60.74	61.39
PGSC0003DMT400074806	Potato	extracellular	58.36	59.3
Solyc08g067030.2.1	Tomato	extracellular	57.82	58.76
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	52.79	58.53
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	56.23	57.61
KRH05109	Soybean	nucleus	55.7	57.38
KRH16010	Soybean	nucleus	55.7	57.38
Solyc03g120040.2.1	Tomato	extracellular, nucleus	38.73	56.59
CDX85713	Canola	extracellular	54.64	56.28
CDX91217	Canola	extracellular	54.38	56.01
PGSC0003DMT400073388	Potato	mitochondrion	54.91	55.8
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	50.13	55.75
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	54.11	55.74
CDX97108	Canola	golgi	54.11	55.74
PGSC0003DMT400014547	Potato	extracellular	54.38	55.71
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	53.58	55.34
Solyc06g067910.2.1	Tomato	nucleus	54.38	55.11
KRH23537	Soybean	nucleus	54.64	55.08
KRH09784	Soybean	nucleus	54.64	55.08
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.05	54.79
PGSC0003DMT400073682	Potato	cytosol	48.01	54.03
CDY05493	Canola	extracellular	52.25	53.83
Bra020500.1-P	Field mustard	extracellular	52.25	53.83
CDX75247	Canola	golgi	51.99	53.7
Bra011349.1-P	Field mustard	golgi	51.99	53.7
CDX68849	Canola	golgi	51.99	53.7
Bra009841.1-P	Field mustard	extracellular	52.25	53.68
CDX88180	Canola	extracellular	52.25	53.68
CDX80511	Canola	extracellular	52.25	53.68
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	57.56	53.58
CDY19801	Canola	extracellular	52.52	53.51
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	52.25	53.39
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	53.58	53.16
KRH52489	Soybean	extracellular, golgi	51.19	52.16
KRH52488	Soybean	extracellular	50.4	52.05
Os02t0527500-00	Rice	plastid	16.98	48.85
KRH44408	Soybean	golgi	52.79	45.54
Os03t0328501-00	Rice	plastid	37.14	45.02
Os03t0807700-01	Rice	plastid	43.24	41.48
Os01t0756600-01	Rice	plasma membrane	42.71	40.35
Os01t0531400-00	Rice	cytosol	28.38	38.77
CDX80516	Canola	plastid	31.03	38.24
Os07t0206900-01	Rice	cytosol, peroxisome	9.28	35.71
Os04t0494800-01	Rice	extracellular	32.89	32.72
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	24.67	25.48

Protein Annotations

EMBL:AK073892	EnsemblPlants:Os04t0494900-01	EnsemblPlantsGene:Os04g0494900	EntrezGene:4336269	Gene3D:2.60.120.260	InterPro:DUF642
InterPro:Galactose-bd-like_sf	InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	ProteinID:BAF15104.1
ProteinID:BAS89876.1	RefSeq:XP_015635221.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785	TMHMM:TMhelix
UniParc:UPI0000DD9158	UniProt:Q0JC33	MapMan:35.2	:	:	:

Description

Similar to Unidentified precursor. (Os04t0494900-01)

Coordinates

chr4:+:24744700..24746565

Molecular Weight (calculated)

40728.7 Da

IEP (calculated)

5.978

GRAVY (calculated)

-0.047

Length

377 amino acids

Sequence
(BLAST)

001: MRRKTEMVRS TCCVVLLLLL SVAARSASAI MDGLLPNGNF EEAPDKSQLN GTRVIGRYAI PQWEISGFVE YIGSGQMQGD MLLPVPEGAY AVRLGNEASI
101: QQRLTLTRGM HYSVTFSAAR TCAQSELLNI TVTPEIGEVP IQTVYTSSGW DSYSWAFKAR RSDVSLIVHN PGVTDDAACG PLIDSFAIKT LQSPPSTKDN
201: LLKNGGFEEG PYIFPNTSWG VLVPPMDEDD YSPLSPWTIM GYTKSVKYVD AAHYAVPGGA RAVELVAGME AALVQEVCTV PGRSYRLEFS VGDAGDGCVG
301: SMSVQAYVSH GSVKVPYESQ GRGGYKRGVL EFTATDKRTR VVFVSMAYTM KPDGTLCGPV VDDASVVGVH SHRRLLL

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.