Factsheet for Zm00001d003186_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11052	Sorghum	mitochondrion	89.71	89.71
Os04t0494900-01	Rice	extracellular	74.14	74.54
TraesCS2A01G351500.1	Wheat	extracellular, golgi	70.18	70.18
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	69.92	70.11
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	69.92	69.92
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	68.87	68.87
GSMUA_Achr1P14570_001	Banana	extracellular	62.01	63.86
Zm00001d044455_P001	Maize	plasma membrane	64.12	63.78
GSMUA_Achr2P08300_001	Banana	extracellular	61.21	62.87
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	62.27	62.11
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	56.46	59.61
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	53.3	59.41
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	57.52	59.24
PGSC0003DMT400074806	Potato	extracellular	57.52	58.76
Solyc08g067030.2.1	Tomato	extracellular	57.26	58.49
Solyc03g120040.2.1	Tomato	extracellular, nucleus	39.05	57.36
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	51.19	57.23
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	54.88	56.83
PGSC0003DMT400014547	Potato	extracellular	55.15	56.79
PGSC0003DMT400073388	Potato	mitochondrion	55.41	56.6
CDX91217	Canola	extracellular	54.62	56.56
Solyc06g067910.2.1	Tomato	nucleus	55.41	56.45
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	54.09	56.16
KRH16010	Soybean	nucleus	54.09	56.01
KRH05109	Soybean	nucleus	53.83	55.74
CDX85713	Canola	extracellular	53.83	55.74
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	58.31	55.67
CDX68849	Canola	golgi	53.56	55.62
CDX75247	Canola	golgi	53.3	55.34
Bra011349.1-P	Field mustard	golgi	53.3	55.34
PGSC0003DMT400073682	Potato	cytosol	48.81	55.22
CDX97108	Canola	golgi	52.77	54.64
KRH09784	Soybean	nucleus	53.56	54.28
CDY19801	Canola	extracellular	52.77	54.05
KRH23537	Soybean	nucleus	53.3	54.01
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	52.51	53.93
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	57.52	53.83
Bra020500.1-P	Field mustard	extracellular	51.98	53.83
CDY05493	Canola	extracellular	51.98	53.83
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	53.83	53.68
CDX80511	Canola	extracellular	51.98	53.68
CDX88180	Canola	extracellular	51.98	53.68
Bra009841.1-P	Field mustard	extracellular	51.98	53.68
KRH52488	Soybean	extracellular	51.45	53.42
KRH52489	Soybean	extracellular, golgi	51.98	53.24
Zm00001d025754_P001	Maize	golgi	56.99	52.94
KRH44408	Soybean	golgi	52.51	45.54
Os03t0328501-00	Rice	plastid	33.51	40.84
Zm00001d043414_P001	Maize	plasma membrane	42.22	40.3
CDX80516	Canola	plastid	31.66	39.22
Zm00001d034547_P002	Maize	extracellular, vacuole	42.74	39.13
Zm00001d015715_P001	Maize	plasma membrane	56.2	36.35
Zm00001d003185_P001	Maize	extracellular	64.12	35.12
Zm00001d012718_P004	Maize	endoplasmic reticulum, plasma membrane	38.79	35.08
Os04t0494800-01	Rice	extracellular	26.65	26.65
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	23.48	24.38

Protein Annotations

EnsemblPlants:Zm00001d003186_P001	EnsemblPlants:Zm00001d003186_T001	EnsemblPlantsGene:Zm00001d003186	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	ProteinID:ONM16324.1	SignalP:SignalP-noTM
SUPFAM:SSF49785	UniParc:UPI000221B423	UniProt:A0A1D6E7A7	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2:-:35030790..35032650

Molecular Weight (calculated)

40287.1 Da

IEP (calculated)

6.396

GRAVY (calculated)

-0.039

Length

379 amino acids

Sequence
(BLAST)

001: MGRGSDAVPD ARRAALLLIV CLAARAASAI QDGLLPNGNF EEAPPKSQLN GTRVMGRNAI PHWEISGYVE YIGSGQKQGD MLLPVPEGAY AVRLGNEASI
101: QQRLAVTPGA RYSITFSAAR TCAQAEQLNV TVAPESDVLP IQTVYTSSGW DSYSWAFQAA GSVVTLIVHN PGVAEDAACG PLIDLFAIKT MPTPRSSKNN
201: MLKNGDFEDG PYIFPNTQWG VLVPPMDEDD YSPLAPWMVL SSTKSVKYVD APHHAVPHGA RAVELVSGME TALVQNVATV PGQLYRLQFS AGDAGNGCVG
301: SMTVQAYAAR GSVKVPYQSQ GKGGHTRGVL DFAAVADQTR VVFVSMGYIM KPDGTLCGPV VDDVSLVSTR NHPARRLLL

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.