Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX79913 | Canola | cytosol | 90.55 | 85.45 |
Bra004650.1-P | Field mustard | extracellular | 93.53 | 50.67 |
CDY14785 | Canola | extracellular, vacuole | 86.57 | 47.03 |
AT2G41800.1 | Thale cress | extracellular, vacuole | 86.07 | 46.76 |
CDY06908 | Canola | extracellular | 83.58 | 44.92 |
Os07t0206900-01 | Rice | cytosol, peroxisome | 19.4 | 39.8 |
VIT_08s0007g08460.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 65.67 | 35.97 |
CDX79912 | Canola | extracellular, vacuole | 79.1 | 35.33 |
CDY48765 | Canola | extracellular | 77.61 | 35.21 |
CDX80516 | Canola | plastid | 49.75 | 32.68 |
Solyc04g015610.2.1 | Tomato | extracellular | 59.2 | 32.25 |
GSMUA_Achr9P25300_001 | Banana | extracellular, vacuole | 57.71 | 31.96 |
CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 53.23 | 31.56 |
CDY28002 | Canola | extracellular | 57.21 | 31.51 |
CDY22149 | Canola | extracellular | 56.72 | 31.23 |
CDY35979 | Canola | extracellular | 56.72 | 31.23 |
CDX97108 | Canola | golgi | 56.22 | 30.87 |
CDX91217 | Canola | extracellular | 56.22 | 30.87 |
CDX85713 | Canola | extracellular | 55.72 | 30.6 |
EER93244 | Sorghum | extracellular, vacuole | 58.71 | 30.57 |
Solyc04g015620.2.1 | Tomato | plastid | 56.22 | 30.54 |
CDX75247 | Canola | golgi | 54.73 | 30.14 |
Os03t0807700-01 | Rice | plastid | 58.71 | 30.03 |
CDX68849 | Canola | golgi | 54.23 | 29.86 |
CDX88180 | Canola | extracellular | 53.73 | 29.43 |
CDX80511 | Canola | extracellular | 53.73 | 29.43 |
CDY05493 | Canola | extracellular | 53.23 | 29.23 |
TraesCS5D01G469800.1 | Wheat | extracellular, vacuole | 57.71 | 29.22 |
CDY19801 | Canola | extracellular | 53.73 | 29.19 |
Zm00001d034547_P002 | Maize | extracellular, vacuole | 59.2 | 28.74 |
GSMUA_Achr6P29630_001 | Banana | cytosol, plastid | 44.78 | 28.48 |
CDY57694 | Canola | extracellular | 51.24 | 27.84 |
HORVU5Hr1G109880.2 | Barley | golgi, vacuole | 57.71 | 27.82 |
CDY54317 | Canola | endoplasmic reticulum | 50.75 | 27.57 |
TraesCS5A01G458700.1 | Wheat | extracellular, golgi | 58.21 | 27.08 |
CDX87297 | Canola | endoplasmic reticulum, extracellular | 43.28 | 25.44 |
CDY39990 | Canola | extracellular | 41.79 | 24.63 |
CDY26302 | Canola | extracellular, golgi, plasma membrane | 39.3 | 19.32 |
CDX84311 | Canola | plasma membrane | 38.31 | 19.25 |
CDY17255 | Canola | plasma membrane | 38.31 | 19.25 |
CDX99870 | Canola | plasma membrane | 37.31 | 19.23 |
CDX70545 | Canola | extracellular, vacuole | 35.82 | 18.85 |
CDX78563 | Canola | extracellular, plasma membrane | 35.82 | 18.7 |
PGSC0003DMT400081713 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 6.47 | 6.34 |
Protein Annotations
EnsemblPlants:CDY48764 | EnsemblPlantsGene:GSBRNA2T00091671001 | InterPro:DUF642 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF5 | PFAM:PF04862 |
ProteinID:CDY48764 | ProteinID:CDY48764.1 | UniParc:UPI0004EDD331 | UniProt:A0A078IH86 | MapMan:35.2 | : |
Description
BnaC04g02170DBnaC04g02170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IH86]
Coordinates
chrLK032790:-:41309..42104
Molecular Weight (calculated)
21924.6 Da
IEP (calculated)
9.035
GRAVY (calculated)
0.120
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MVETLTLGLS RQYVVAIKEM LPLGYNRGGN LVKNGGFEIG PHVFANYSTG ILIPARIQDL ISPLPGWIVE SLKPVKYIDN RHFKVPSGLA AVELVAGRES
101: AIAQIIRTDA GKAYILSFTV GDAQNGCHGS MTVEAFAGKE PFKLSFVSEG KGVFKTGHFR FVADSDRTRL TFYSAFYHTK LHDFGHLCGP VLDSVVVLPT
201: H
101: AIAQIIRTDA GKAYILSFTV GDAQNGCHGS MTVEAFAGKE PFKLSFVSEG KGVFKTGHFR FVADSDRTRL TFYSAFYHTK LHDFGHLCGP VLDSVVVLPT
201: H
001: MSLYHSLSIF LLLSLCHGSY SLQPRRVPHL DGILPNGNFE ITPLKSNMKG RQIIGANSLP HWEIAGHVEL VSGGPQPGGF YFPVPRGVHA VRLGNLGTIS
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
Arabidopsis Description
At2g41800/T11A7.10 [Source:UniProtKB/TrEMBL;Acc:O22940]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.